Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_G19
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot...    30   4.9  
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro...    30   4.9  
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ...    30   4.9  
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P...    30   4.9  

>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 protein.
          Length = 1412

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 174  IPHQRPIFKATPPXTSRGTREWEEGRSSALWDRTTMDYSVKPV 302
            +P+ +   +A PP  S G    EEG+S+  +D+ + + S  PV
Sbjct: 1068 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1110


>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p protein.
          Length = 1425

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 174  IPHQRPIFKATPPXTSRGTREWEEGRSSALWDRTTMDYSVKPV 302
            +P+ +   +A PP  S G    EEG+S+  +D+ + + S  PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117


>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
            protein MUS101 protein.
          Length = 1425

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 174  IPHQRPIFKATPPXTSRGTREWEEGRSSALWDRTTMDYSVKPV 302
            +P+ +   +A PP  S G    EEG+S+  +D+ + + S  PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117


>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
            protein.
          Length = 1425

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 174  IPHQRPIFKATPPXTSRGTREWEEGRSSALWDRTTMDYSVKPV 302
            +P+ +   +A PP  S G    EEG+S+  +D+ + + S  PV
Sbjct: 1075 VPNTQSPIEAAPPRRSDGPTLSEEGQSTINFDKISFEESAVPV 1117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,233,543
Number of Sequences: 53049
Number of extensions: 903313
Number of successful extensions: 2176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)