Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_G15
(913 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical ... 33 0.28
AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical ... 33 0.28
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 30 2.6
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 29 3.5
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006832-3|AAF39997.1| 176|Caenorhabditis elegans Hypothetical ... 29 3.5
U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical p... 29 4.6
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 29 4.6
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 4.6
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 29 4.6
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 29 6.1
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 8.1
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 8.1
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 8.1
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 471 SWMASIMFIFAPIAVFIYGIAADKFGRK 554
+W+A+I FI A + +YG D FGRK
Sbjct: 97 AWIATIQFIGALVGALVYGHLGDHFGRK 124
>AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical
protein C09D4.1b protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.28
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 303 ENEEKYGSKHFQVLMAIIVCLPVFSYGTAMGWISPHKALLMGEDTPSNAPVTETEVSWMA 482
E +EK K F+ I+V S WI + ++ V+ V W
Sbjct: 26 EKQEKIEPKVFRKRWVILVIFMFLSGSNGAQWI---QYSIIANIISDYYKVSFQAVDW-T 81
Query: 483 SIMFIFAPIAVFIYGI-AADKFGRKNALLCCSIPIAVGWMIKLISAHP 623
S++++ I FI DK+G + ++L ++ VG IKL+S HP
Sbjct: 82 SMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLLSTHP 129
>AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical
protein C09D4.1a protein.
Length = 586
Score = 33.1 bits (72), Expect = 0.28
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 303 ENEEKYGSKHFQVLMAIIVCLPVFSYGTAMGWISPHKALLMGEDTPSNAPVTETEVSWMA 482
E +EK K F+ I+V S WI + ++ V+ V W
Sbjct: 137 EKQEKIEPKVFRKRWVILVIFMFLSGSNGAQWI---QYSIIANIISDYYKVSFQAVDW-T 192
Query: 483 SIMFIFAPIAVFIYGI-AADKFGRKNALLCCSIPIAVGWMIKLISAHP 623
S++++ I FI DK+G + ++L ++ VG IKL+S HP
Sbjct: 193 SMIYMLTYILFFIPAAWLLDKWGLRLSVLLGALGNCVGAWIKLLSTHP 240
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 465 EVSWMASIMFIFAPIAVFIYGIAADKFGRK 554
+ +W+A+I FI I YG D FGRK
Sbjct: 95 DAAWVATIQFIGVLIGAITYGHLGDHFGRK 124
>U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical
protein C23H3.5 protein.
Length = 403
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/65 (18%), Positives = 35/65 (53%)
Frame = -2
Query: 231 DITAQIINKREIHKKARVIFFYKSAKVKKKVSNFEIVNRSKYETALPASTRVMARGVRAN 52
++ AQ++ +++K A + K K++++ E+V + ++E+ + R+ + A
Sbjct: 187 EVVAQVLEMEKVYKIAAGVMMTADLKFPKELNDLEVVRKIRHESRIFDERRMETSNLTAI 246
Query: 51 VKILR 37
++L+
Sbjct: 247 SRLLK 251
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +3
Query: 459 ETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIPIAVGWMIKLIS 614
ET S AS MFI I+ I G D GRK +L S +G M L S
Sbjct: 57 ETIFSACASFMFIGLAISFAIMGKLMDGLGRKETILLRSFLGIIGSMAMLTS 108
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 483 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSI 578
++ FI I F G+ ADK GRK L C +
Sbjct: 151 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLV 182
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 483 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSI 578
++ FI I F G+ ADK GRK L C +
Sbjct: 117 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLV 148
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 483 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSI 578
++ FI I F G+ ADK GRK L C +
Sbjct: 151 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLV 182
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 483 SIMFIFAPIAVFIYGIAADKFGRKNALLCCSI 578
++ FI I F G+ ADK GRK L C +
Sbjct: 117 AVYFIGQMIGSFTCGVMADKIGRKKVLFWCLV 148
>AC006832-3|AAF39997.1| 176|Caenorhabditis elegans Hypothetical
protein ZK355.3 protein.
Length = 176
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 707 ISLTYQGXDHEGSSSTEANERPGPD-QGNWMCRY 609
+SLTY + ++ A +PGPD Q W C Y
Sbjct: 72 VSLTYLPSPSQPAAQISAQPKPGPDFQAFWSCPY 105
>U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical
protein C32B5.15 protein.
Length = 296
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 216 IINKREIHKKARVIFFYKSAKVKKKVSNF 130
I+N + H K+ +IFF+K ++K+ +F
Sbjct: 146 ILNLHQTHLKSNIIFFWKQGMSQQKIHHF 174
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 433 SSPMRSAL*GEIQPMAVPYENTGRQTIIAINT*KCLLPYFSSFS 302
SS S + G++ P A P E T + I INT KC+L SS +
Sbjct: 2323 SSSQSSGILGKLLPPA-PEEETTSKEIREINTAKCILNVISSLN 2365
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 433 SSPMRSAL*GEIQPMAVPYENTGRQTIIAINT*KCLLPYFSSFS 302
SS S + G++ P A P E T + I INT KC+L SS +
Sbjct: 2323 SSSQSSGILGKLLPPA-PEEETTSKEIREINTAKCILNVISSLN 2365
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 694 TRGQTTKAPPAPKPMNARAPIRAIGCADINF 602
T TT PP P N API + C I F
Sbjct: 977 TTSTTTTLPPTTTPYNLSAPIPKLDCNTIQF 1007
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +2
Query: 404 PSQSASHGRRHTIERPRHGDGSILDGVHHVHIRTDRRLHL----WHCC 535
P + H RRHT E+P + H+RT RR H +HCC
Sbjct: 259 PDILSRHTRRHTGEKPFKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCC 306
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 264 LKEKYLKKNTDDITAQIINKREIHKK 187
L +KYL+ N DDI + I+ K + KK
Sbjct: 848 LLKKYLRNNMDDIISSILRKEKKQKK 873
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 751 FHKLLETF*CSSWVIFYRST-PCCGYCWPSPWCTS 852
FH L W + +T CC W SPW T+
Sbjct: 914 FHDFLAIMTYMDWTMVLVTTLSCCSMLWESPWPTT 948
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 751 FHKLLETF*CSSWVIFYRST-PCCGYCWPSPWCTS 852
FH L W + +T CC W SPW T+
Sbjct: 892 FHDFLAIMTYMDWTMVLVTTLSCCSMLWESPWPTT 926
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 751 FHKLLETF*CSSWVIFYRST-PCCGYCWPSPWCTS 852
FH L W + +T CC W SPW T+
Sbjct: 914 FHDFLAIMTYMDWTMVLVTTLSCCSMLWESPWPTT 948
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,246,546
Number of Sequences: 27780
Number of extensions: 472388
Number of successful extensions: 1454
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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