Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_G10
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 98 9e-21
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 36 0.030
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 25 2.3
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 25 2.3
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 25 2.3
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 25 2.4
Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical pr... 29 6.0
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 97.9 bits (233), Expect = 9e-21
Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +1
Query: 484 VSGALSLALEELNNGVDLLPDVEIHMQWNNTKYDMVTSTRLITEMSRAGVVAFFGPEGRC 663
VSGAL A+ E+N DL+P ++ + NT + STRL E +AG F GPE C
Sbjct: 141 VSGALVAAIVEINQDKDLIPAYQLKYVFGNTCGNDSHSTRLFMEHWQAGARVFIGPEKNC 200
Query: 664 ETEAIIAQSRNLPMISYKCSDYQVSR----LPNFARLEPPGVXATKALISLLRYYRWNK 828
+TEA +A S+NLP+ISY+C+D +SR FAR PP KA +SL++ Y W K
Sbjct: 201 KTEAAMAASQNLPIISYRCNDQDISRDDYHYRTFARTVPPAGEIFKAFMSLMKQYNWRK 259
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 36.3 bits (80), Expect = 0.030
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Frame = +1
Query: 415 KFNITIGYLPALTGDLRDRQGLTVSGALSLALEELNNGVDLLPDVEIHMQWN-NTKYDMV 591
+ +TIG++ A+ D + L VS A L++ DL DVEI Q Y+ V
Sbjct: 66 RIRLTIGHIGAIGALRNDVKILEVSHKALQAEGILDD--DL--DVEIISQTGCGESYEGV 121
Query: 592 TSTRLITEMSRAGVVAFFGPEGRCETEAI--IAQSRNLPMISYKCSDYQVS---RLPNFA 756
+ + + V AF GP E +A+ +A N+P+I Y + ++ P A
Sbjct: 122 AVAADMYHLQK--VKAFIGPYCNAEMDAVARMAAFWNIPIIGYMAASNNLADKNAYPTLA 179
Query: 757 RLEPPGVXA-TKALISLLRYYRWNK 828
R+ + +A ++LR+Y WNK
Sbjct: 180 RISLRTTNSIAEATCAMLRHYGWNK 204
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 664 ETEAIIAQSRNLPMISYKCSDYQVSRLPNFARLEPPGVXATKALISLLRY---YRWNKSL 834
+ E I+ ++ +L + S K +D + + PNF + PP +A ++++ Y R+N
Sbjct: 534 DEECIVPKASDLTLAS-KLNDQHLGKHPNFQKPRPPKGKQAEAHLAIVHYAGTVRYNVKG 592
Query: 835 YCMKNLD 855
+ KN D
Sbjct: 593 WLEKNKD 599
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3
Query: 533 STPLFSSSSANDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAANTNTRA 354
S+PL +++ D P T SP + RKS V A + P+ S P +P NT +
Sbjct: 557 SSPLMIRAASVDQNPMTASPSVIRKSQVTATQSPVSYRKIPPTSPTPQRRP-LNNTEVPS 615
Query: 353 P 351
P
Sbjct: 616 P 616
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 619 SRAGVVAFFGPEGRCETEAIIA---QSRNLPMISYKCSDYQVSRLPNFA---RLEPP 771
+R VVA G G + ++A Q +P +SY + ++S P FA R+ PP
Sbjct: 141 TRQPVVAVVGAAGS-QVSVMVASMLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPP 196
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 454 GDLRDRQGLTVSGALSLALEELNNGVDLLPDVEIHMQ 564
G ++ QG+ A+ ALE++N LLP + Q
Sbjct: 65 GKIKADQGVQRMVAMLFALEKVNRDRQLLPQASLGAQ 101
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 619 SRAGVVAFFGPEGRCETEAIIA---QSRNLPMISYKCSDYQVSRLPNFA---RLEPP 771
+R VVA G G + ++A Q +P +SY + ++S P FA R+ PP
Sbjct: 141 TRQPVVAVVGAAGS-QVSVMVASMLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPP 196
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 454 GDLRDRQGLTVSGALSLALEELNNGVDLLPDVEIHMQ 564
G ++ QG+ A+ ALE++N LLP + Q
Sbjct: 65 GKIKADQGVQRMVAMLFALEKVNRDRQLLPQASLGAQ 101
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 619 SRAGVVAFFGPEGRCETEAIIA---QSRNLPMISYKCSDYQVSRLPNFA---RLEPP 771
+R VVA G G + ++A Q +P +SY + ++S P FA R+ PP
Sbjct: 141 TRQPVVAVVGAAGS-QVSVMVASMLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPP 196
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 454 GDLRDRQGLTVSGALSLALEELNNGVDLLPDVEIHMQ 564
G ++ QG+ A+ ALE++N LLP + Q
Sbjct: 65 GKIKADQGVQRMVAMLFALEKVNRDRQLLPQASLGAQ 101
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 619 SRAGVVAFFGPEGRCETEAIIA---QSRNLPMISYKCSDYQVSRLPNFA---RLEPP 771
+R VVA G G + ++A Q +P +SY + ++S P FA R+ PP
Sbjct: 141 TRQPVVAVVGAAGS-QVSVMVASMLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPP 196
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 454 GDLRDRQGLTVSGALSLALEELNNGVDLLPDVEIHMQ 564
G ++ QG+ A+ ALE++N LLP + Q
Sbjct: 65 GKIKADQGVQRMVAMLFALEKVNRDRQLLPQASLGAQ 101
>Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical
protein F08B12.2 protein.
Length = 359
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -2
Query: 687 LRNYGFSFTATFGSEKGYYTCTTHFGDEPGGSYHVIFRVVPL----HVNLHIRQQIDSIV 520
LRNYG SFT F S K + T G+ P I ++ L +V + Q D +
Sbjct: 80 LRNYGASFTENFYSMKRIASGT---GNPPNDGRERIMSLITLVGWPYVENKLNQLYDRLK 136
Query: 519 QLFKCQ 502
++++C+
Sbjct: 137 EVYECR 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,045,087
Number of Sequences: 27780
Number of extensions: 434318
Number of successful extensions: 1246
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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