Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_G06
         (1235 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    28   2.3  
01_01_0957 + 7516314-7517489                                           30   3.3  
05_05_0181 + 23033059-23033775                                         29   5.7  

>01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,
            7039698-7039768,7040148-7040224,7040380-7040527,
            7040973-7041134,7041374-7041694
          Length = 597

 Score = 27.9 bits (59), Expect(2) = 2.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 1190 KKKKKKKXXXPPPPPP 1143
            KKKK+     PPPPPP
Sbjct: 101  KKKKRHHHHHPPPPPP 116



 Score = 21.4 bits (43), Expect(2) = 2.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 1160 PPPPPPXXXXK 1128
            PPPPPP    K
Sbjct: 127  PPPPPPPPPFK 137


>01_01_0957 + 7516314-7517489
          Length = 391

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -2

Query: 1192 KKKKKKKKXXXPPPPPP 1142
            K KKKKKK   PPP PP
Sbjct: 115  KTKKKKKKQPAPPPQPP 131


>05_05_0181 + 23033059-23033775
          Length = 238

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 1193 KKKKKKKKXXXPPPPPP 1143
            KKK+K+ +   PPPPPP
Sbjct: 155  KKKRKRTQQQQPPPPPP 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,090,735
Number of Sequences: 37544
Number of extensions: 327949
Number of successful extensions: 5521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2779
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)