Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_G03
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0222 + 12928470-12928779,12931919-12932052,12932352-129325...    32   0.74 
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745...    29   3.9  
02_03_0097 + 15166077-15166349,15166623-15166694,15166715-151671...    29   3.9  
01_05_0016 + 17177812-17178084,17178358-17178480,17178526-171788...    29   3.9  
07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026     29   5.2  
12_02_0725 - 22545423-22546251,22546352-22546547,22546791-225469...    29   6.9  
07_03_1381 - 26166673-26166747,26166972-26167544                       29   6.9  
07_01_0346 - 2501825-2501908,2502143-2502244,2502623-2502646,250...    28   9.1  

>04_03_0222 +
           12928470-12928779,12931919-12932052,12932352-12932548,
           12932807-12932999,12933078-12933467,12933544-12933623,
           12933757-12933851,12933869-12934077,12934150-12934206,
           12934466-12934549
          Length = 582

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 585 RLSCTCRSCSNLRLHRKSTLSFEVFLQGRGRQESMYHLWNR 463
           R+ C C  C N +LH K  +  ++ L  +G  E+ YH+W+R
Sbjct: 43  RVRCPCTKCKNGQLHDKRIV--QMHLCNKGFTEN-YHVWSR 80


>08_02_0678 -
           19971416-19971930,19971970-19973347,19974122-19974518,
           19974533-19974645,19977436-19977903,19977935-19978059,
           19978192-19978452,19984254-19984647
          Length = 1216

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -2

Query: 496 PPGINVPSLEQ---KQYGNWHSAGSH 428
           P G  +PS E+   K+Y  WH++GSH
Sbjct: 918 PAGHTIPSAEELGKKRYCKWHNSGSH 943


>02_03_0097 +
           15166077-15166349,15166623-15166694,15166715-15167161,
           15167579-15167794,15167873-15168213,15168329-15168947
          Length = 655

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -2

Query: 496 PPGINVPSLEQ---KQYGNWHSAGSH 428
           P G  +PS E+   K+Y  WH++GSH
Sbjct: 181 PTGHTIPSAEELGKKRYCKWHNSGSH 206


>01_05_0016 +
           17177812-17178084,17178358-17178480,17178526-17178862,
           17178896-17179039,17179555-17180219
          Length = 513

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -2

Query: 496 PPGINVPSLEQ---KQYGNWHSAGSH 428
           P G  +PS E+   K+Y  WH++GSH
Sbjct: 186 PAGHTIPSAEELGKKRYCKWHNSGSH 211


>07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026
          Length = 453

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 31/111 (27%), Positives = 45/111 (40%)
 Frame = -2

Query: 769 SHRPIXRTLCLASLAVAKLYLLLSHVHRVRELVPSRSYCIHETKKNVPFIGHPFGLLIFP 590
           S RP    L L +LA+A L+LLLS         PS S+           +  P      P
Sbjct: 3   SRRPSPLLLLLLALALAFLFLLLS------PSAPSASHLSSSLASAAAAVSTPASSPPAP 56

Query: 589 LKTFLYLSKLFKFTAPSKVNIII*GVSAGSRPPGINVPSLEQKQYGNWHSA 437
           +K ++Y     KFT     + +     AG+      +P  E +  G+ HSA
Sbjct: 57  VKIYMY-DLPAKFTYGVVRSYMAARARAGAAGAASAIPDDELRYPGHQHSA 106


>12_02_0725 -
           22545423-22546251,22546352-22546547,22546791-22546973,
           22547076-22547275,22548030-22548133
          Length = 503

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 446 PITVLLLFQRWYIDSWRPRPCRNTSNDNVDFRWSRKFEQLRQVQESLQRKD*QSKRMSYK 625
           P+   L  ++W  DSW  R  +        FRW  +   + + Q S   K  Q K +++ 
Sbjct: 178 PLYSGLSCKKWLSDSWACRLTQRKDFAYEKFRWQPEGCDMPEFQASQFLKRMQDKTIAFV 237

Query: 626 GDIL 637
           GD L
Sbjct: 238 GDSL 241


>07_03_1381 - 26166673-26166747,26166972-26167544
          Length = 215

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 312 GLYFDDISKYCTFKAEARCGPIP 380
           G +FDD  +Y   KA AR GP P
Sbjct: 131 GAFFDDERQYAAAKAAARLGPPP 153


>07_01_0346 -
           2501825-2501908,2502143-2502244,2502623-2502646,
           2502693-2502819,2503122-2505109,2505804-2505821
          Length = 780

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 23/89 (25%), Positives = 37/89 (41%)
 Frame = +2

Query: 497 PRPCRNTSNDNVDFRWSRKFEQLRQVQESLQRKD*QSKRMSYKGDILLGLMNTVTT*WYK 676
           PR     S  N ++    K +Q  ++  S   K+ +S  + Y G  +LG         + 
Sbjct: 585 PRRSYAISEQNAEYEELIKLKQTLEIA-STALKEVESNELDYNG--ILGKNEQEKQLEFI 641

Query: 677 LSHTMDMR*QQVQFRNSKACKTKGTXNGP 763
           L   MD+  + VQ  N  +   KG+  GP
Sbjct: 642 LVSIMDLSKEFVQIENKMSGDMKGSEKGP 670


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,018,264
Number of Sequences: 37544
Number of extensions: 597617
Number of successful extensions: 1762
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)