Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_G01
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81543-5|CAB04427.2|  507|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81543-5|CAB04427.2|  507|Caenorhabditis elegans Hypothetical
           protein F49B2.5 protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 725 SARNYLMTSYIQYDICDFGLXVSRLKENE 811
           +ARN L+ + +   I DFGL    +KENE
Sbjct: 360 AARNILINNSLSVKIADFGLARILMKENE 388


>U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical
           protein C17H11.2 protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 209 NCIREYFSRNSQCQLVRGPVPDPLPLSYYRVDI 307
           N  R+ ++   +CQ++R  VP P P+S   V +
Sbjct: 146 NSFRDCYNLYKKCQMLRPGVPVPRPMSLLNVSV 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,631,883
Number of Sequences: 27780
Number of extensions: 290406
Number of successful extensions: 682
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)