Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_F21
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.71 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.71 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.71 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.71 

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 296 YNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGG---RLDWANKNAQATIDLNRQIGGR 463
           Y + ++  D+  +TG AYG   + PG  S  + G     ++ N   +   ++ R  GGR
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPGGR 116


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 139 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 35
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 139 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 35
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 139 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 35
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,790
Number of Sequences: 438
Number of extensions: 5229
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)