Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_F17
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprot...    31   2.8  
L02106-1|AAA99873.1|  471|Drosophila melanogaster ribonucleoprot...    31   2.8  
BT010254-1|AAQ23572.1|  196|Drosophila melanogaster RE34656p pro...    31   2.8  
BT001320-1|AAN71075.1|  434|Drosophila melanogaster AT15526p pro...    31   2.8  
AE014297-4014|AAX53003.1|  434|Drosophila melanogaster CG6354-PE...    31   2.8  
AE014297-4013|AAX53002.1|  434|Drosophila melanogaster CG6354-PD...    31   2.8  
AE014297-4012|AAX53001.1|  471|Drosophila melanogaster CG6354-PI...    31   2.8  
AE014297-4011|AAX53000.1|  471|Drosophila melanogaster CG6354-PH...    31   2.8  
AE014297-4010|AAX52999.1|  471|Drosophila melanogaster CG6354-PF...    31   2.8  
AE014297-4009|AAF56633.1|  471|Drosophila melanogaster CG6354-PB...    31   2.8  
AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG...    31   2.8  
AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC...    31   2.8  
AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA...    31   2.8  

>L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>L02106-1|AAA99873.1|  471|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>BT010254-1|AAQ23572.1|  196|Drosophila melanogaster RE34656p
           protein.
          Length = 196

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 7   RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 43


>BT001320-1|AAN71075.1|  434|Drosophila melanogaster AT15526p
           protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4014|AAX53003.1|  434|Drosophila melanogaster CG6354-PE,
           isoform E protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4013|AAX53002.1|  434|Drosophila melanogaster CG6354-PD,
           isoform D protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4012|AAX53001.1|  471|Drosophila melanogaster CG6354-PI,
           isoform I protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4011|AAX53000.1|  471|Drosophila melanogaster CG6354-PH,
           isoform H protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4010|AAX52999.1|  471|Drosophila melanogaster CG6354-PF,
           isoform F protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4009|AAF56633.1|  471|Drosophila melanogaster CG6354-PB,
           isoform B protein.
          Length = 471

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG,
           isoform G protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC,
           isoform C protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


>AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA,
           isoform A protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 787 RAPTPKGGGWGVFQKXPPPXKXKKNPP---XWGXXPP 888
           R P P     G +Q+ PPP      PP    WG  PP
Sbjct: 245 RPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPP 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,432,537
Number of Sequences: 53049
Number of extensions: 377838
Number of successful extensions: 3668
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3420
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)