Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_F12
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY308063-1|AAQ75554.1| 290|Caenorhabditis elegans EXC-4 protein. 88 7e-18
AL132876-18|CAD21669.2| 290|Caenorhabditis elegans Hypothetical... 88 7e-18
Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical... 34 0.16
AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical... 34 0.16
U13643-4|AAA21082.2| 258|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 29 3.5
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 29 3.5
Z81561-1|CAB04552.2| 550|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z70783-7|CAA94858.1| 239|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF099925-13|AAC69503.2| 287|Caenorhabditis elegans Hypothetical... 28 8.2
>AY308063-1|AAQ75554.1| 290|Caenorhabditis elegans EXC-4 protein.
Length = 290
Score = 88.2 bits (209), Expect = 7e-18
Identities = 84/249 (33%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Frame = +1
Query: 160 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 339
+I NG P +EL +KAS ID RR GA LFCQE++M+LY L E+ ++V TV++
Sbjct: 6 QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64
Query: 340 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMK-SVPXGHNLFVQDKEVASLI 510
F+ NF PPI+I + L +N +IE I + LF +D I
Sbjct: 65 NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122
Query: 511 ENLYSKLKLVL---VRKDEQKS---------AALRAHLGRIDGLLERRGDQVPNGR--HY 648
ENLY KL L V D+ K A ++ H R+ L DQ+ + R Y
Sbjct: 123 ENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNI-DQLLSERKSRY 181
Query: 649 VLFRLRADAEVAAHPRRREV-LRGLRNTD-DVP-CFVALHVSHVSARRVHAELS---ADQ 810
+L + + PR + + GL D+P F L ++A R A + ADQ
Sbjct: 182 LLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESCPADQ 241
Query: 811 DIINHYKLQ 837
DII+HYK Q
Sbjct: 242 DIIHHYKEQ 250
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +2
Query: 620 ETRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTTFRALWRYMYHMYQLDAFTQSC 799
++R+L G++M +DCELMPRL HIR+ G + F+IP F LW Y+ Y+ AF +SC
Sbjct: 178 KSRYLLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESC 237
Query: 800 P 802
P
Sbjct: 238 P 238
>AL132876-18|CAD21669.2| 290|Caenorhabditis elegans Hypothetical
protein Y105E8A.22 protein.
Length = 290
Score = 88.2 bits (209), Expect = 7e-18
Identities = 84/249 (33%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Frame = +1
Query: 160 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 339
+I NG P +EL +KAS ID RR GA LFCQE++M+LY L E+ ++V TV++
Sbjct: 6 QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64
Query: 340 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMK-SVPXGHNLFVQDKEVASLI 510
F+ NF PPI+I + L +N +IE I + LF +D I
Sbjct: 65 NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122
Query: 511 ENLYSKLKLVL---VRKDEQKS---------AALRAHLGRIDGLLERRGDQVPNGR--HY 648
ENLY KL L V D+ K A ++ H R+ L DQ+ + R Y
Sbjct: 123 ENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNI-DQLLSERKSRY 181
Query: 649 VLFRLRADAEVAAHPRRREV-LRGLRNTD-DVP-CFVALHVSHVSARRVHAELS---ADQ 810
+L + + PR + + GL D+P F L ++A R A + ADQ
Sbjct: 182 LLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESCPADQ 241
Query: 811 DIINHYKLQ 837
DII+HYK Q
Sbjct: 242 DIIHHYKEQ 250
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +2
Query: 620 ETRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTTFRALWRYMYHMYQLDAFTQSC 799
++R+L G++M +DCELMPRL HIR+ G + F+IP F LW Y+ Y+ AF +SC
Sbjct: 178 KSRYLLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESC 237
Query: 800 P 802
P
Sbjct: 238 P 238
>Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical
protein F26H11.5 protein.
Length = 238
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2
Query: 620 ETRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTTFRALWRYMYHMYQLDAFTQSC 799
ET+FL D + DC ++ RL IRVA K ++EIP + Y+ Y + F SC
Sbjct: 141 ETKFLISDDVTHIDCLVLTRLHSIRVAAKMLKNYEIPADLSHVLDYLKAGYATEMFRVSC 200
Query: 800 P 802
P
Sbjct: 201 P 201
>AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical
protein Y39B6A.43b protein.
Length = 734
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 484 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGLLERRGDQVPNGRHYVLFRL 663
Q ++ ENL+ +LKL L+R++ Q A L R DGLL R + H+ +
Sbjct: 650 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGLLARMEQRFGVEHHHHIVHQ 708
Query: 664 RADAEVAAH 690
+ EV H
Sbjct: 709 EQEEEVWDH 717
>AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical
protein Y39B6A.43a protein.
Length = 731
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 484 QDKEVASLIENLYSKLKLVLVRKDEQKSAALRAHLGRIDGLLERRGDQVPNGRHYVLFRL 663
Q ++ ENL+ +LKL L+R++ Q A L R DGLL R + H+ +
Sbjct: 647 QQSTSSTSAENLH-ELKLQLIRREMQNQDRFSAVLDRADGLLARMEQRFGVEHHHHIVHQ 705
Query: 664 RADAEVAAH 690
+ EV H
Sbjct: 706 EQEEEVWDH 714
>U13643-4|AAA21082.2| 258|Caenorhabditis elegans Hypothetical
protein T07E3.3 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 432 LFVLKYRQPIIDQYGRVCRFEVGAEIWGRLLHVHC-CHLQTDCLELSQQI*VHEVFLTEQ 256
LF+ R+ D Y + +G +W + L VH CH+ T C EL + E +
Sbjct: 127 LFLTSIREQYPDLYEKAIH-HLGKRLWEQRLPVHYGCHMSTVCRELGISFKIAEDIVARL 185
Query: 255 TGALSSSIDRRCLYYKLDFR 196
+ + SI + +DF+
Sbjct: 186 SSPENRSILHKNCKEAVDFK 205
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 829 CSG**CPGRRTALRERVELIHVIHVTPQSTE 737
CSG CP T L ++ +HV+H+ P +TE
Sbjct: 532 CSGVDCPNTVT-LNAQMGAVHVLHIHPSTTE 561
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 829 CSG**CPGRRTALRERVELIHVIHVTPQSTE 737
CSG CP T L ++ +HV+H+ P +TE
Sbjct: 532 CSGVDCPNTVT-LNAQMGAVHVLHIHPSTTE 561
>Z81561-1|CAB04552.2| 550|Caenorhabditis elegans Hypothetical
protein K03D10.3 protein.
Length = 550
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 265 QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTN 369
+ Y ++ +++ +K + + +D +KPP + RTN
Sbjct: 38 KRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTN 72
>Z70783-7|CAA94858.1| 239|Caenorhabditis elegans Hypothetical
protein ZK856.10 protein.
Length = 239
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 196 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 300
P ++ +I+A I R+G CL Q +F D+++ AE
Sbjct: 79 PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112
>AF099925-13|AAC69503.2| 287|Caenorhabditis elegans Hypothetical
protein K01A2.1 protein.
Length = 287
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 349 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKS 456
P D RT F A HP + ID + L E+I + ++S
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRS 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,292,081
Number of Sequences: 27780
Number of extensions: 435434
Number of successful extensions: 1198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -