Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_F08
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 84 1e-16
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 84 1e-16
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 83 4e-16
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 83 4e-16
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 83 4e-16
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 83 4e-16
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 83 4e-16
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 83 4e-16
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 80 3e-15
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 79 6e-15
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 78 1e-14
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 78 1e-14
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 60 2e-09
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 60 2e-09
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 54 1e-07
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 49 4e-06
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 31 1.5
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 31 1.5
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 30 2.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 30 2.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 30 2.7
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 8.1
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAVLNAQLIEIPYR 818
+KF + T R+F+ S++ + ++ R + KY E+ Q++ +PY+
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYK 227
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAVLNAQLIEIPYR 818
+KF + T R+F+ S++ + ++ R + KY E+ Q++ +PY+
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYK 227
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 82.6 bits (195), Expect = 4e-16
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Frame = +3
Query: 459 RILQSFPXDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 629
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 630 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIE 806
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAEND--QFQVLS 214
Query: 807 IPYRAIIVADRMY--KDRWXTTQSLXTXXT-SXYHLFS 911
+PY+ A ++ K R+ T+SL T + + HL S
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLS 252
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 79.8 bits (188), Expect = 3e-15
Identities = 39/111 (35%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-YGESAVLNAQLIEIPY 815
SKF + T+ R+F+ S+ ++ ++P + + +++ Y E + Q++ + Y
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVLF--QVLSLKY 212
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 236 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 412
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 413 KMANKVYVHDGGKLDENF 466
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 78.6 bits (185), Expect = 6e-15
Identities = 39/111 (35%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYFKADW 163
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-YGESAVLNAQLIEIPY 815
SKF + T+ R+F+ S+ ++ ++P + +++ Y E + Q++ + Y
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVLF--QVLSLKY 212
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 236 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 412
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 413 KMANKVYVHDGGKLDENF 466
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/110 (35%), Positives = 66/110 (60%)
Frame = +3
Query: 489 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 668
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 669 SKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYR 818
KF E ++ +F +S + VPM+ + DY Y + Q+I IP++
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK 220
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/110 (35%), Positives = 66/110 (60%)
Frame = +3
Query: 489 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 668
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQGDWR 174
Query: 669 SKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYR 818
KF E ++ +F +S + VPM+ + DY Y + Q+I IP++
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK 220
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 489 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 668
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 669 SKFDERLTSDRDFYVSKDKTIKVPMM 746
KFD S++DF + + K+ M
Sbjct: 167 DKFDGMSVSEQDFTLHTGEKKKIKFM 192
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 224 IQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 394
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 395 IKGVELKMANKVYVHDGGKLDENF 466
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 489 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWS 668
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 669 SKFDERLTSDRDFYVSKDKTIKVPMM 746
KFD S++DF + + K+ M
Sbjct: 167 DKFDGMSVSEQDFTLHTGEKKKIKFM 192
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 224 IQGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 394
+ +S+V S S+ L+ + G + +++ + G D+ + F+ S+++++
Sbjct: 19 VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77
Query: 395 IKGVELKMANKVYVHDGGKLDENF 466
KGVE+ +ANKVY+ G ++ F
Sbjct: 78 TKGVEVYLANKVYLKKGFTVNPTF 101
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 110 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 169
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAVLNAQLIEIPY--RAIIVAD 836
+KF + TS ++F+ + + + ++ G + KY E+ Q++ +PY + +
Sbjct: 170 QNKFHKLSTSKKEFFCTANSHRNIKFLHATGANRKYCEND--KFQVLSLPYTDSSFEMTI 227
Query: 837 RMYKDRWXTTQSLXTXXTS 893
+ K+++ ++L T TS
Sbjct: 228 FLPKEQFGLAEALKTLGTS 246
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +3
Query: 486 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 665
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 109 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 168
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 758
+KF + TS ++F+ + + + ++ G
Sbjct: 169 QNKFHKLSTSKKEFFCTANSHRNIKFLHATG 199
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 293 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAV 472
SD + H K G DDDAIR F D R K + N++ D GK + ++
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISYQE 588
Query: 473 VSXGRL-QFG 499
G+L QFG
Sbjct: 589 FVDGQLMQFG 598
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAV 785
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 687
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 666 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAV 785
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 179
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
K08H10.7 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 426 KYTFMMVE--N*TRILQSFPXD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 593
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 594 VNPDS 608
VNP S
Sbjct: 895 VNPSS 899
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 426 KYTFMMVE--N*TRILQSFPXD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 593
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 594 VNPDS 608
VNP S
Sbjct: 895 VNPSS 899
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -1
Query: 210 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHVCGLRLSNVKTQQHQN 46
FG + GC+ I + ++ DG CHCRDG D + +C+ + +N TQ N
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLN 4148
Query: 45 LK 40
K
Sbjct: 4149 TK 4150
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -1
Query: 210 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHVCGLRLSNVKTQQHQN 46
FG + GC+ I + ++ DG CHCRDG D + +C+ + +N TQ N
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLN 4148
Query: 45 LK 40
K
Sbjct: 4149 TK 4150
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 165 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 67
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 773 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 681
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,234
Number of Sequences: 27780
Number of extensions: 377953
Number of successful extensions: 1107
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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