Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E16
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 274 4e-74
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 274 4e-74
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 41 0.001
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 32 0.65
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.6
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 4.6
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 29 4.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 4.6
U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional gl... 28 8.0
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 274 bits (673), Expect = 4e-74
Identities = 132/229 (57%), Positives = 166/229 (72%), Gaps = 4/229 (1%)
Frame = +2
Query: 125 KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 298
KVY+VGVGMT F KP + G DYPD KEAV AL D ++KY DIQQA GY+FG + CG
Sbjct: 7 KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66
Query: 299 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFEKMAPGALG--G 472
QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G DV L GFE+MAPG+L
Sbjct: 67 QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLA 126
Query: 473 GHFDDRTNPMDRHTLKMAEIADLTGAPITAQYFGNAAIEHMKKYGTTELHLAKIAAKNHR 652
DDR +D+H M+E L AP+TAQ FGNAA EHM+KYG+ H AKIA KNH
Sbjct: 127 APIDDRALSVDKHISVMSETYGLEPAPMTAQMFGNAAKEHMEKYGSKREHYAKIAYKNHL 186
Query: 653 HGVKNPRAQGKREYTVEEILNSRKIYGPLTKLECCPTSDGAGAAVLMSE 799
H V NP++Q +E+++++++N+RKIY + LEC PTSDGA AAVL+SE
Sbjct: 187 HSVHNPKSQFTKEFSLDQVINARKIYDFMGLLECSPTSDGAAAAVLVSE 235
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 274 bits (673), Expect = 4e-74
Identities = 132/229 (57%), Positives = 166/229 (72%), Gaps = 4/229 (1%)
Frame = +2
Query: 125 KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 298
KVY+VGVGMT F KP + G DYPD KEAV AL D ++KY DIQQA GY+FG + CG
Sbjct: 7 KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66
Query: 299 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFEKMAPGALG--G 472
QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G DV L GFE+MAPG+L
Sbjct: 67 QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLA 126
Query: 473 GHFDDRTNPMDRHTLKMAEIADLTGAPITAQYFGNAAIEHMKKYGTTELHLAKIAAKNHR 652
DDR +D+H M+E L AP+TAQ FGNAA EHM+KYG+ H AKIA KNH
Sbjct: 127 APIDDRALSVDKHISVMSETYGLEPAPMTAQMFGNAAKEHMEKYGSKREHYAKIAYKNHL 186
Query: 653 HGVKNPRAQGKREYTVEEILNSRKIYGPLTKLECCPTSDGAGAAVLMSE 799
H V NP++Q +E+++++++N+RKIY + LEC PTSDGA AAVL+SE
Sbjct: 187 HSVHNPKSQFTKEFSLDQVINARKIYDFMGLLECSPTSDGAAAAVLVSE 235
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Frame = +2
Query: 92 GIVIIIITMPRKVYVVGVGMT---NFVKPSTGGDYPDFGKEAVLEALADARIKYDDIQQA 262
GI + ++VG T +F + P+ A+ AL +K IQ+
Sbjct: 12 GITTSAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEV 71
Query: 263 VCGYVFGDSTCGQRVLYQVGM-----TGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVA 427
G V + GQ Q + + + VN CS+G A+ L+ Q I+ G D A
Sbjct: 72 FLGQVC-QANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFA 130
Query: 428 LAVGFEKMA 454
+ G E M+
Sbjct: 131 IGGGMESMS 139
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 287 STCGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVG 439
S R+ Y + G P ++V+ CS+ AL L+ I G CD A+ G
Sbjct: 147 SMFSNRISYTFDLQG-PSFSVDTACSSSLLALQLAVDSIRQGQCDAAIVAG 196
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +2
Query: 191 DFGKEAVLEALADARIKYDDIQQAVCGYVFGD---STCGQRVLYQVGMTG-IPIYNVNNN 358
D KEA+ + ++ Y+ + +CG V + S + G+ IP + V
Sbjct: 50 DLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLA 109
Query: 359 CSTGSNALFLSKQLIEGGMCDVALAVGFEKMA 454
C + + A+ ++ G + +A G E ++
Sbjct: 110 CISSNVAMTTGMGMLATGNANAIIAGGVELLS 141
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 344 NVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFE-KMAPGALG 469
NVN C GSN S Q++ C +++GF+ + A LG
Sbjct: 491 NVNGYCQGGSNGQCNSNQVLINNQCYNTVSIGFQCQFAQQCLG 533
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 503 DRHTLKMAEIADLTGAPITAQYFGNAAIEHMKKYGTTELHLAKIAA-KNHRHGVKNPRAQ 679
DR KM EIA+ TG P IE G T + L+ +AA + ++ + P
Sbjct: 380 DRIAKKMVEIAEKTGKPGALTPGATTLIEPTS--GNTGIGLSLVAAVRGYKCLITMPEKM 437
Query: 680 GKREYTVEEILNSRKIYGP 736
K + T +L S + P
Sbjct: 438 SKEKSTTLSVLGSTIVRTP 456
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 607 NDRAPSS*NCSQKSPSWS*KSEGSRQKRIYSRRNSEFEKDLRSS 738
N R +S + + P W K + SR R SR +SE + RSS
Sbjct: 25 NRRRTNSGSGDKDKPMWKSKRDSSRSSRSRSRSSSESDSRSRSS 68
>U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional
glyoxylate cycle proteinprotein.
Length = 1005
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 611 TELHLAKIAAKNHRHGVKNP---RAQG-KREYTVEEILNSR 721
T+ H AAKN VK+ R +G KR+YTVE++L R
Sbjct: 36 TKTHTMSSAAKNFYQVVKSAPKGRFKGIKRDYTVEDVLKLR 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,724,150
Number of Sequences: 27780
Number of extensions: 417004
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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