Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E13
(1056 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 37 0.023
11_06_0610 - 25449085-25453284 37 0.031
02_01_0016 + 110796-110979,111252-111768,111847-112213 35 0.12
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 34 0.16
01_06_0146 + 26969011-26969995,26970878-26970930 34 0.16
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 33 0.38
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.67
06_01_0178 + 1386981-1387505 30 3.5
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 29 4.7
08_01_0059 - 394001-394708 29 4.7
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 29 4.7
10_08_0214 - 15915156-15915713 29 6.2
07_03_1136 + 24218601-24218734,24218769-24219906 29 6.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 6.2
06_03_0790 - 24636805-24637770 29 8.2
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 37.1 bits (82), Expect = 0.023
Identities = 28/79 (35%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = +3
Query: 765 PXPAXXPPPHSPLXGVXXL*SXXPRXCCXXXGPSPXXGPXPXARPLXP-LPXXXXXXXXP 941
P P PPP G L S P C PSP P PL P LP P
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSP-PCQPPLPPSPPPATPPPPPPLSPSLPPPPPPP--P 1187
Query: 942 XPSGXPVAPLXGRXPXSPP 998
PSG P P P PP
Sbjct: 1188 LPSGPPPQPAPPPLPIQPP 1206
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 36.7 bits (81), Expect = 0.031
Identities = 29/101 (28%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +3
Query: 765 PXPAXX-PPPHSPLXGVXXL*SXXPRXCCXXXGPSPXXGPXPXARPLXPLPXXXXXXXXP 941
P PA PPP PL + P PSP P A P P P
Sbjct: 984 PSPAKSTPPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPPPSPVESVLPP 1043
Query: 942 XPSGXPVAPLXGRXP---XSPPXCXXNTXXXPWXRXPPXPP 1055
S P AP+ P SPP + P PP P
Sbjct: 1044 VKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEP 1084
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/77 (25%), Positives = 25/77 (32%)
Frame = +3
Query: 765 PXPAXXPPPHSPLXGVXXL*SXXPRXCCXXXGPSPXXGPXPXARPLXPLPXXXXXXXXPX 944
P P PPP +P+ P P P P P A P+ P P
Sbjct: 1210 PPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAA-PVILSPPAVKSLPPPA 1268
Query: 945 PSGXPVAPLXGRXPXSP 995
P P P+ P +P
Sbjct: 1269 PVSLPPPPVKSLPPPAP 1285
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 34.7 bits (76), Expect = 0.12
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPS--GXPVAPLXGRXPXS-PPXCXXNTXXXPW 1031
PSP P P A L P P P S P+ PL R P PP P
Sbjct: 153 PSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRLPPIWRPTPPSLPV 212
Query: 1032 XRXPPXPP 1055
PP PP
Sbjct: 213 DTMPPPPP 220
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 34.3 bits (75), Expect = 0.16
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = -3
Query: 1054 GGXGGXRXQGXXXVFXXQXGGEXGXRPXXGATGXPDGXGXXXLXXXXGRGXKGRAXGXGP 875
GG GG G + GG G R G G P G G GRG G G G
Sbjct: 18 GGRGGGGGDGRGGGYGGAGGGGVGGR---GGRGPPGGGGGRGYEPGGGRGYGGGGGGGGR 74
Query: 874 XXGEG 860
G G
Sbjct: 75 GYGGG 79
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXPXSPPXCXXNTXXXPWXRX 1040
P P P A P P P P PS P P SPP N P
Sbjct: 44 PPPPPLPASAAAPTTPSPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAP 103
Query: 1041 PPXP 1052
PP P
Sbjct: 104 PPAP 107
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 33.1 bits (72), Expect = 0.38
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 846 CXXXGPSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXPXSPP 998
C GP P GP P +P P P P P P P G P P
Sbjct: 152 CFHHGPKP--GPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKP 200
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXP-XSPPXCXXNT---XXXP 1028
PSP P P +P P P P P P P G P PP P
Sbjct: 167 PSPPK-PKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGPPQP 225
Query: 1029 WXRXP-PXPP 1055
W P P PP
Sbjct: 226 WWPIPFPKPP 235
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.67
Identities = 28/100 (28%), Positives = 29/100 (29%), Gaps = 5/100 (5%)
Frame = +3
Query: 771 PAXXPPPHSPLXGVXXL*SXXPRXCCXXXGPSPXXG----PXPXARPLXPLPXXXXXXXX 938
P PPP P G S P P P P P PLP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Query: 939 PXPSGXPVAPLXG-RXPXSPPXCXXNTXXXPWXRXPPXPP 1055
P P P+ P P PP N P PP PP
Sbjct: 604 PPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
>06_01_0178 + 1386981-1387505
Length = 174
Score = 29.9 bits (64), Expect = 3.5
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = -3
Query: 1054 GGXGGXRXQGXXXVFXXQXGGEXGXRPXXGATGXPDGXGXXXLXXXXGRGXKGRAXGXGP 875
GG GG G + GG G G G G G GRG G + G G
Sbjct: 64 GGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGRKG-----GRGGDGGSGGAGG 118
Query: 874 XXGEGPXXXQQXRG 833
G+G Q RG
Sbjct: 119 RGGDGGSGGQGGRG 132
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXPXSP 995
P P GP P + PLP P P P A + GR SP
Sbjct: 1044 PEPNGGPRPPTTGVGPLPACQTMLGAPDPQEGPEATV-GRPHLSP 1087
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAP 968
P P P P + P+ P P P P P+AP
Sbjct: 19 PPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAP 54
>07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -3
Query: 1054 GGXGGXRXQGXXXVFXXQXGGEXGXRPXXGATGXPDGXGXXXLXXXXGRGXKGRAXGXGP 875
GG GG Q G+ G R A G G G GRG GR G G
Sbjct: 33 GGRGGGHPQQQQQQQPGYGRGDGGGRGPAPAAGGVVGRGTGG-GGGGGRGDGGRGRGRGG 91
Query: 874 XXGEG 860
G+G
Sbjct: 92 GGGDG 96
>10_08_0214 - 15915156-15915713
Length = 185
Score = 29.1 bits (62), Expect = 6.2
Identities = 26/98 (26%), Positives = 27/98 (27%)
Frame = -1
Query: 1056 GGGXGGXGXRAXXXCXVNXXXXKXGXXXXXXXPGXXTGXAXXXXXPXXGGAXRGGXRGXA 877
GGG GG G G G +G A GG GG G
Sbjct: 32 GGGGGGGGGGEGGGGGYGGSGYGSGSGYGE---GGGSGGAAGGGYGRGGGGGGGGGEGGG 88
Query: 876 XXXGRAPXQXSSXXXXXTXAXXPXXGGSGGXGXRRGXG 763
G Q S A GG GG G G G
Sbjct: 89 SGSGYGSGQGSGYGAGVGGAGGYGSGGGGGGGQGGGAG 126
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = -1
Query: 1056 GGGXGGXGXRAXXXCXVNXXXXKXGXXXXXXXPGXXTGXAXXXXXPXX--GGAXRGGXRG 883
GGG GG R G PG G P GG GG G
Sbjct: 150 GGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLG 209
Query: 882 XAXXXGRAPXQXSSXXXXXTXAXXPXXGGSGGXG 781
G AP + A GG GG G
Sbjct: 210 GGGGEGGAPERVIGGGGGGGGALKCVVGGGGGGG 243
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXPXSPPXCXXNTXXXP---- 1028
P P P P A P P P P G P P P PP + P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 1029 WXRXPPXPP 1055
PP PP
Sbjct: 373 KKGGPPPPP 381
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 861 PSPXXGPXPXARPLXPLPXXXXXXXXPXPSGXPVAPLXGRXPXSPP 998
P+P P P A PL P P + PVAP P + P
Sbjct: 175 PAPPPVPSPSAPPLPPQPPPPRNQAQADKAPIPVAPPGAAVPPAQP 220
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.7 bits (61), Expect = 8.2
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = -3
Query: 1054 GGXGGXRXQGXXXVFXXQXGGEXGXRPXXGATGXPDGXGXXXLXXXXGRGXKGRAXGXGP 875
GG GG G GG G G G DG G GRG KGR G G
Sbjct: 127 GGGGGGGGGGGGGGGGGGGGGNGGDDGDNGDDGE-DGDGDAG-----GRGGKGRGRGRGR 180
Query: 874 XXGEG 860
G G
Sbjct: 181 GMGSG 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,851,271
Number of Sequences: 37544
Number of extensions: 299825
Number of successful extensions: 896
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3129488528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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