Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_E10
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947     29   5.3  
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505...    29   5.3  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   5.3  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   9.2  

>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
          Length = 660

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -3

Query: 810 KRXPKXQTPFPRGGGRXXXXXKNPPTPPPXTXXKKXKP 697
           K+     TP  R  GR       PPTPPP    K  KP
Sbjct: 616 KKGAAASTPPGRRIGRPPKRAAAPPTPPPSKRAKDDKP 653


>08_02_0743 -
           20647440-20647927,20647997-20648426,20650127-20650570,
           20650639-20650692
          Length = 471

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
 Frame = -3

Query: 870 KPXXPXPKXPGXXXXXXGKRKRXPKXQTPF----PRGGGRXXXXXKNPPTPPP 724
           KP  P    P         R R PK + P     P+  GR     K  P PPP
Sbjct: 96  KPRDPNAPPPPPKPSSPRPRGRPPKSKDPISDAIPKSRGRPPKKAKTAPAPPP 148


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +3

Query: 192 INTLAESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 341
           ++   E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 254 VHATLEEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 174 PKEDNSINTLAESAKKTIEELREKVE 251
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,187,129
Number of Sequences: 37544
Number of extensions: 355211
Number of successful extensions: 808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)