Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E10
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.67
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 174 PKEDNSINTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 341
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -3
Query: 915 PXIXGKTXXPPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPP 736
P G PP GG P P G R P P P+ GG P
Sbjct: 274 PPPTGSPPPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Query: 735 TPPP 724
PPP
Sbjct: 330 PPPP 333
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = -3
Query: 888 PPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPPTPPP 724
PP G P P G P P P GG P PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -3
Query: 915 PXIXGKTXXPPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPP 736
P G PP GG P P G R P P P+ GG P
Sbjct: 295 PPPTGSPPPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Query: 735 TPPP 724
PPP
Sbjct: 351 PPPP 354
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = -3
Query: 888 PPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPPTPPP 724
PP G P P G P P P GG P PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -3
Query: 915 PXIXGKTXXPPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPP 736
P G PP GG P P G R P P P+ GG P
Sbjct: 280 PPPTGSPPPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Query: 735 TPPP 724
PPP
Sbjct: 336 PPPP 339
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = -3
Query: 888 PPFGGXKPXXPXPKXPGXXXXXXGKRKRXPKXQTPFPRGGGRXXXXXKNPPTPPP 724
PP G P P G P P P GG P PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 180 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 350
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 180 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 350
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 772 PPGKRGLXFWXPFPFPXXXXXXPXXFRXGGXGFXPPKGGXXGFP 903
PPG G P P+P P GF PP G G+P
Sbjct: 717 PPGPPGPQ-QHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYP 759
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,504,159
Number of Sequences: 27780
Number of extensions: 281947
Number of successful extensions: 753
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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