Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E08
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 4.4
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 4.4
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 4.4
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 4.4
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 4.4
DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein. 31 7.7
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 31 7.7
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 31 7.7
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 31 7.7
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 31 7.7
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 31 7.7
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 7.7
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 31 7.7
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 31 7.7
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 31 7.7
AB020717-1|BAA74933.2| 1315|Homo sapiens KIAA0910 protein protein. 31 7.7
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 759 PGXSPGKXPRAPPXSXPAVTGXPXPXFP------LREXVGLFHNPPCRFPNPGLGP 908
PG PG P PP A G P P P G PP P PG GP
Sbjct: 143 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 759 PGXSPGKXPRAPPXSXPAVTGXPXPXFP------LREXVGLFHNPPCRFPNPGLGP 908
PG PG P PP A G P P P G PP P PG GP
Sbjct: 143 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 759 PGXSPGKXPRAPPXSXPAVTGXPXPXFP------LREXVGLFHNPPCRFPNPGLGP 908
PG PG P PP A G P P P G PP P PG GP
Sbjct: 143 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 759 PGXSPGKXPRAPPXSXPAVTGXPXPXFP------LREXVGLFHNPPCRFPNPGLGP 908
PG PG P PP A G P P P G PP P PG GP
Sbjct: 70 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 125
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 759 PGXSPGKXPRAPPXSXPAVTGXPXPXFP------LREXVGLFHNPPCRFPNPGLGP 908
PG PG P PP A G P P P G PP P PG GP
Sbjct: 143 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
>DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein.
Length = 500
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 762 GXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFPNP 896
G SP PR P P ++ P P P+R P R P P
Sbjct: 19 GTSPSSSPRTSPCQSPTISEGPVPSLPIRP-----SRAPSRTPGP 58
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 684 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 732
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 78 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 126
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 684 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 732
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 694 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 742
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 78 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 126
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 673 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 721
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 762 GXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFPNP 896
G SP PR P P ++ P P P+R P R P P
Sbjct: 1039 GTSPSSSPRTSPCQSPTISEGPVPSLPIRP-----SRAPSRTPGP 1078
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 762 GXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFPNP 896
G SP PR P P ++ P P P+R P R P P
Sbjct: 1039 GTSPSSSPRTSPCQSPTISEGPVPSLPIRP-----SRAPSRTPGP 1078
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 756 IPGXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFP-NPGLGPXP 914
+PG S G P PP P G P P PL G+ PP FP PG+ P P
Sbjct: 721 LPG-SAGIPP--PPPPLPGEAGMPPPPPPLPGGPGI--PPPPPFPGGPGIPPPP 769
>AB020717-1|BAA74933.2| 1315|Homo sapiens KIAA0910 protein protein.
Length = 1315
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 762 GXSPGKXPRAPPXSXPAVTGXPXPXFPLREXVGLFHNPPCRFPNP 896
G SP PR P P ++ P P P+R P R P P
Sbjct: 1075 GTSPSSSPRTSPCQSPTISEGPVPSLPIRP-----SRAPSRTPGP 1114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,557,709
Number of Sequences: 237096
Number of extensions: 1151617
Number of successful extensions: 3139
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3031
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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