Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E05
(934 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 32 0.10
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.71
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.71
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.94
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.8
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 3.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.8
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 5.0
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 5.0
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 5.0
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 5.0
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 26 6.6
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 6.6
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.6
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 26 8.7
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 26 8.7
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 8.7
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 8.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 8.7
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 32.3 bits (70), Expect = 0.10
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +1
Query: 382 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 537
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 538 AKKVSSNVQETNEKLAPKIKAAYDDFAKNTXGGDQEDPGGRQRQAVSVDI 687
K + T +KL KI+ + Q + G A S ++
Sbjct: 187 YKDMEQENASTIQKLTSKIRELQASQLDHDLQASQNESAGLDVNAKSAEV 236
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 561
KA + LE+ ++ E + EE+ H + T+ + + + +QE ++ K +
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYR 412
Query: 562 QETNE 576
Q+ +E
Sbjct: 413 QKLSE 417
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 364 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQK 534
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ + S++
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 535 L 537
L
Sbjct: 112 L 112
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 561
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNL 185
Query: 562 QETNEKLAP 588
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 385 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 489
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +1
Query: 397 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 576
++ Q+IE T L K D+E++ +++ + V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 577 KLAPKIKAAYDDF 615
L+ K + DD+
Sbjct: 554 VLSKSSKES-DDY 565
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.8
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +1
Query: 367 GDANGKAKEAL----EQSRQNIERTAEELRKAHPDVE---KNATALREKLQAAVQNTVQE 525
G+ N A+ AL E S +N+E K+ + TA ++ + V QE
Sbjct: 333 GNVNLSARRALFEKKESSTKNVENPVSHHLKSPVRTSFPPASTTASKQDSPSTVPVDKQE 392
Query: 526 SQK-LAKKVSSNVQETNEKLAPKIKAAYDDFAKNTXGGDQEDP 651
+ K + K+VSSN E+ + A FAK + + P
Sbjct: 393 TAKPINKQVSSNETSAQEEPRESVAALRARFAKANVSENNDPP 435
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 435 LGRALDVLPRLFQSLLGLAVRVSERXPGDSW 343
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 180 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 299
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.6 bits (56), Expect = 5.0
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +3
Query: 24 YREFLKILTHSSVLQSXFASP----PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPD 191
Y + T S S ++ P P S S + A + L + V R
Sbjct: 146 YSSYSASETSSVASYSYYSGPNPATPSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQ 205
Query: 192 FFKDIEHHTKEFHKTLEQQFNSLTKSKDA 278
F + +EH+ K+LE+Q + L +SKDA
Sbjct: 206 FMEPVEHN-HPLSKSLEEQSSFLEQSKDA 233
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 174 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 263
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 412 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK 591
+NI + E+ R + NA+ + K Q + T++ Q+LAK + +++ E+L+
Sbjct: 136 KNILKAIEDSRYPFVANKLNASTIEVKPQ---RTTLESRQQLAKVLEGYAKDSREQLSAM 192
Query: 592 IKAAYDDFAKN 624
+ AKN
Sbjct: 193 RTELKKEIAKN 203
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 382 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 531
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 397 LEQSRQNIERTAEELRKAHPDVEK 468
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +1
Query: 544 KVSSNVQET--NEKLAPKIKAAYD 609
+V N++ET EK A K+KA+YD
Sbjct: 299 EVDLNIEETVLKEKYADKVKASYD 322
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 388 KEALEQSRQNIERTAEELRKAHPD--VEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 561
++ L + R NI ++ + K+ D + N L+ A+ + V+E ++
Sbjct: 53 QKRLAKLRANIHLESQVIGKSRIDRMLATNVEKLQTVSHASTLHDVEEFYTSHSAKPLDI 112
Query: 562 QETNEKLAPKIKAAY 606
E NE+L+ +++AY
Sbjct: 113 SEINERLSEAVQSAY 127
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 320
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 321 LQQL 332
Q+
Sbjct: 73 NNQI 76
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 412 ASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 290
AST+ K PWP + L +P + + CS+ +E ++ +
Sbjct: 38 ASTLEKEPWPASTALLVMPG---GRDMGYCSSFNETIYRKI 75
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 8.7
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQK-LAKK 546
D+ KAK LEQ+R +ERT E A A+ L+ + ++ +V + +K L +K
Sbjct: 403 DSIKKAKTELEQARIELERTQREGNYA------RASELQYAIIPELERSVPKEEKTLEEK 456
Query: 547 VSSNVQE--TNEKLAPKIKAAYDDFAKNTXGGDQE 645
S V + T++ +A + A N G+++
Sbjct: 457 KPSMVHDSVTSDDIAVVVSRATGIPTTNLMRGERD 491
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,560,670
Number of Sequences: 5004
Number of extensions: 40167
Number of successful extensions: 182
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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