Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E01
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 222 6e-59
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 29 0.92
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 28 2.1
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 27 3.7
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 27 3.7
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 4.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.9
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 26 6.5
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 8.5
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 26 8.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 8.5
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 222 bits (542), Expect = 6e-59
Identities = 101/162 (62%), Positives = 128/162 (79%)
Frame = +3
Query: 231 VTVVLGAQWGDEGKGKVVDLLAVDSDIVCRCQGGNNAGHTVVVDGKEFDFHLLPSGIINQ 410
+TVVLG+QWGDEGKGK+VD+L + D+ RCQGGNNAGHT+V +G +DFH+LPSG++N
Sbjct: 16 ITVVLGSQWGDEGKGKLVDILCDNVDVCARCQGGNNAGHTIVANGVTYDFHILPSGLVNP 75
Query: 411 KCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVISDRAHLVFDIHQQVDGLQEAEK 590
KC ++IG+GVV++LP F EL+K E KG+K C R+ ISDRAHLVFD HQ+ D L EAE
Sbjct: 76 KCQNLIGSGVVVYLPAFFSELEKLEQKGLK-CRDRIFISDRAHLVFDYHQRADALNEAEL 134
Query: 591 GKNSLGTTKKGIGPAYSAKATRNGIRIGDLLGDFSLFEDKYR 716
GK S+GTT KGIGPAYS KATR+GIR+ L ++ FE +YR
Sbjct: 135 GKQSIGTTGKGIGPAYSTKATRSGIRVHHLY-HWAEFEARYR 175
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 29.1 bits (62), Expect = 0.92
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 399 IINQKCTSVIGNGVVIHLPGLFEELKKNELKG---MKGCEGRLVISDRAHLVFDIHQQVD 569
I+++ S+ VVI G EL+ NE+ +K EG ++ +D + D+H QVD
Sbjct: 166 IVDELKKSLALKAVVIR-EGQVHELEANEVVPGDILKLDEGTIICADGRVVTPDVHLQVD 224
Query: 570 GLQEAEKGKNSLGTTKKGIGPAYSAKATRNG 662
Q A G+ SL K P +++ + G
Sbjct: 225 --QSAITGE-SLAVDKHYGDPTFASSGVKRG 252
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 522 SRVCLRNPSCLSTRSSSAPQTVRAGGSP 439
S + +NP+ ST SS+ P V GGSP
Sbjct: 87 SELTSKNPTVSSTTSSANPAIVSNGGSP 114
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -2
Query: 817 SAGPDRRTLGTLTARYRCSTPMPG----TCVCTRPXRXRYLSSNRLKSPSR 677
S GP +RT G++T +P+PG + + T+P R R S +R++ R
Sbjct: 81 SLGPSKRTGGSMTPGLGAMSPIPGSGRSSPLYTQP-RSRATSPSRVRQADR 130
>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -3
Query: 579 PGDRRPVDVYRKQDEPCPRSRVCLRNPSCLSTRSSSAPQTVRAGGSPRHYL*QTC 415
P + PVDV ++ P ++C R+ +C T S S+ + V P L C
Sbjct: 191 PKVKGPVDVEKQCGVLLPNGQMCARSLTC-KTHSMSSKRAVPGRSQPYDVLLAAC 244
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -2
Query: 832 PYP*PSAGPDRRTLGTLTARYRCSTPMPGTCVCTRPXRXRYLSSNRLKSPSRS 674
P P PS+ P + +L + R S P T +S+ LK+PS S
Sbjct: 567 PSPLPSSNPSQASLTEESLSTRSSPTKPSTTSLRSQSLVNRFASSTLKAPSSS 619
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 412 FWLMMPLGNRWKSNSLPSTTTVCPAL 335
F ++MP N +K SLP T PAL
Sbjct: 1193 FSVVMPSANAYKKRSLPIKATANPAL 1218
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 90 YGKNLREPLNFRFYS*IMVTTVNSINTEINGELSRSCPSKKTKMEN 227
YGK L E + Y + T+ +I +N PS+KT ++N
Sbjct: 921 YGKFLEELKSSDLYKIVFRDTLQAILDIMNNNAETLSPSEKTNLKN 966
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 388 NRWKSNSLPSTTTVCPALF--PP*QRQTMSESTASKSTTFPLP 266
NRW ++ +PS + + P+ F P S S ASK + P
Sbjct: 23 NRWSTSHIPSLSEINPSSFQSPSPSPFASSTSLASKPARYSKP 65
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 592 VRTRSAPRKRASDRPTPRRQPETASESAICSETSVCSKTNTG 717
V + P + + P + E +ES I ETS +T+TG
Sbjct: 77 VNKPAEPESKETSAPAAAVEIEKENESIISKETSQAPETSTG 118
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 456 GLFEELKKNELKGMKGCEGRLVI-SDRAHLV 545
G FEE K+ L ++G EG++++ D HL+
Sbjct: 186 GDFEERLKSVLSDLEGAEGKVILFVDEMHLL 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,731,566
Number of Sequences: 5004
Number of extensions: 81521
Number of successful extensions: 236
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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