Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E01
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0529 - 3968813-3968983,3969060-3969116,3969215-3969526,396... 198 7e-51
03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379... 186 3e-47
09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386 31 1.3
08_01_0432 + 3782594-3783027,3783678-3783759,3784067-3784117,378... 31 1.7
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 31 1.7
05_07_0213 + 28443724-28443775,28443901-28444007,28444757-284456... 31 1.7
07_03_1750 - 29207692-29208225 30 2.2
03_06_0130 + 31893599-31894106,31894230-31894354,31894414-318945... 29 3.9
01_05_0161 - 18757122-18757331,18757931-18758488 29 3.9
12_01_0288 - 2160981-2161076,2161150-2161236,2161333-2161419,216... 29 5.1
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 5.1
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 29 6.8
12_01_0158 - 1199788-1200590,1200724-1200856 28 9.0
11_01_0159 - 1318825-1319618,1319722-1319854 28 9.0
08_02_1012 + 23550314-23551504 28 9.0
>03_01_0529 -
3968813-3968983,3969060-3969116,3969215-3969526,
3969606-3970298,3971473-3971763
Length = 507
Score = 198 bits (482), Expect = 7e-51
Identities = 90/153 (58%), Positives = 119/153 (77%), Gaps = 1/153 (0%)
Frame = +3
Query: 225 NKVTVVLGAQWGDEGKGKVVDLLAVDSDIVCRCQGGNNAGHTVV-VDGKEFDFHLLPSGI 401
++V+ VLG+QWGDEGKGK+VD+LA DIV RCQGG NAGHT+ +GK+F HL+PSGI
Sbjct: 64 SQVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGI 123
Query: 402 INQKCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVISDRAHLVFDIHQQVDGLQE 581
+++ V+GNG VIH+PG F E+ E G+ C GR+++SDRAHL+FD+HQ VDGL+E
Sbjct: 124 LHEGTLCVVGNGAVIHVPGFFNEIDGLESNGVN-CNGRILVSDRAHLLFDLHQAVDGLRE 182
Query: 582 AEKGKNSLGTTKKGIGPAYSAKATRNGIRIGDL 680
AE + +GTTK+GIGP YS+K TRNG+R+ DL
Sbjct: 183 AELANSFIGTTKRGIGPCYSSKVTRNGLRVCDL 215
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 775 ELSKYRAYADLVRPMVKDTVSYLHRXIXSGKEGAXXXNXCPMLDI 909
E+ +Y+ +A+ + P + DTV L+ I K+ MLDI
Sbjct: 249 EVERYKRFAERLEPFIADTVHLLNESIQQKKKILVEGGQATMLDI 293
>03_05_0804 +
27835508-27835805,27836372-27836421,27837306-27837998,
27838077-27838388,27838528-27838698
Length = 507
Score = 186 bits (452), Expect = 3e-47
Identities = 92/171 (53%), Positives = 117/171 (68%), Gaps = 19/171 (11%)
Frame = +3
Query: 225 NKVTVVLGAQWGDEGKGKVVDLLAVDSDIVCRCQ------------------GGNNAGHT 350
++V VLG QWGDEGKGK+VD+LA DIV RCQ GG NAGHT
Sbjct: 65 SQVAGVLGTQWGDEGKGKLVDILAQRFDIVARCQVGCLSSGAIHADCLYRTTGGANAGHT 124
Query: 351 VV-VDGKEFDFHLLPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVIS 527
+ +GK+F HL+PSGI+N+K V+GNG V+HLPG F+E+ E G+ CEGR+++S
Sbjct: 125 IYNSEGKKFSLHLVPSGILNEKTMCVVGNGAVVHLPGFFKEIDGLESNGIS-CEGRILVS 183
Query: 528 DRAHLVFDIHQQVDGLQEAEKGKNSLGTTKKGIGPAYSAKATRNGIRIGDL 680
DRAHL+FD HQ VDGL+E E G + +GTTK+GIGP YS K RNG+R+ DL
Sbjct: 184 DRAHLLFDFHQTVDGLREVELGNSLIGTTKRGIGPCYSNKVIRNGLRVSDL 234
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 766 IDSELSKYRAYADLVRPMVKDTVSYLHRXIXSGKEGAXXXNXCPMLDI 909
+ E+ KY +A+ + P + DTV ++++ I K+ MLDI
Sbjct: 265 LKEEVEKYEKFAERLGPYITDTVHFMNQSILQNKKILVEGGQATMLDI 312
>09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386
Length = 349
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 348 TVVVDGKEFDFHLLPSGIINQKCTSVIGNGVVI 446
+V VDG F F L SG+ CT+ + +GV +
Sbjct: 253 SVAVDGGSFMFQLYGSGVYTGPCTADVNHGVTV 285
>08_01_0432 +
3782594-3783027,3783678-3783759,3784067-3784117,
3784279-3784514,3785008-3785058,3790905-3791106,
3791695-3791977,3792617-3792687
Length = 469
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +1
Query: 532 GLILFSIYINRSTVSRKLRRVRTRSAPRKRASDRPTPRRQPETASESAICSETSVCSKTN 711
GL F+ Y N SR V T S P R RR P T + + ++ CS T
Sbjct: 295 GLRDFTAYANPHHRSR--HAVTTGSVPHSSGILRQQIRRSPPTFTAQELRAKERFCSDTY 352
Query: 712 TGXLXASYKRMFPALELNIDSEL 780
+G + A + + +E + +L
Sbjct: 353 SGLVAACFPPLLRVIEFVGEDDL 375
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 547 SIYINRSTVSRKLRRVRT-RSAPRKRASDRPTPRRQPETASESAICSETSVCSKTNTGXL 723
S+ I + R+ R R+ RS P R S PTP P TAS +A S T + T
Sbjct: 50 SVQITAEQILREARSGRSPRSVPPSRRS--PTPSSSPSTASAAARSSRTPSAAPGGTSAR 107
Query: 724 XAS 732
+S
Sbjct: 108 GSS 110
>05_07_0213 +
28443724-28443775,28443901-28444007,28444757-28445644,
28445760-28445762,28446006-28446398
Length = 480
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = -1
Query: 770 SMFNSNAGNMRLYEAXKXPVFVFEQTEVSEQIADSDAVSGCLRGVGRSDALFRGAERVLT 591
S F S N+R+ E + F V +++ + + G+GR++A+ + +
Sbjct: 275 SFFVSGCSNLRILENKTPNLSSFFCRGVGAKLSLGETLKMKKLGMGRANAVHYARAELPS 334
Query: 590 LLSFLETVDLLMYIENKMSPVRDHESAFA 504
++ LET+++ E +HES FA
Sbjct: 335 IMPNLETLNIRSGPEAVQQRSMEHESVFA 363
>07_03_1750 - 29207692-29208225
Length = 177
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 583 LRRVRTRSAPRKRASDRPTPRRQPETASESAICSE-TSVCSKTNTGXLXASYKRMFPALE 759
LRRVR + P A+ RP PR +P AS++ + C K L A ALE
Sbjct: 92 LRRVRLGAPPPPPAA-RPAPRSRPPLASKAKVLGRLVPGCRKLAFPALLAEASDYIAALE 150
Query: 760 LNI 768
+ +
Sbjct: 151 MQV 153
>03_06_0130 +
31893599-31894106,31894230-31894354,31894414-31894538,
31894645-31894704,31895294-31895378
Length = 300
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 820 PSAGPDRRTLGTLTARYRCSTPMPGTCVCTRPXRXRYLSSNRLKSPSRSPILMPFL 653
P +GP R + +L A + P P T TRP R R ++ + SR P +P L
Sbjct: 14 PMSGP-MRAIHSLAAAP--AAPAPATETATRPLRRRTSAARASRESSRQPQALPDL 66
>01_05_0161 - 18757122-18757331,18757931-18758488
Length = 255
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 583 LRRVRTRSAPRKRASDRPT-PRRQPETASESAICSETSVCSKTNTGXLXASYKRMFPALE 759
+++ R +AP A+ P P R A++ A CS T+V S ++ A +++ P
Sbjct: 101 MQKTRPATAPAMAATHSPPLPLRSANAAAQPAACSSTAVASPFHSAGHRALDRQLRPPAP 160
Query: 760 L 762
L
Sbjct: 161 L 161
>12_01_0288 -
2160981-2161076,2161150-2161236,2161333-2161419,
2161641-2161726,2161805-2161908,2162618-2162704,
2162790-2162913,2163058-2163176,2163268-2163397,
2163583-2163671,2163804-2163892,2164579-2164672,
2164778-2164857,2164952-2165041,2166307-2166393,
2166495-2166539,2166966-2167042,2167120-2167225,
2167383-2167464,2167553-2167624,2168106-2168183,
2168259-2168349,2168826-2168979
Length = 717
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 552 YRKQDEPCPRSRVCLRNPS 496
Y +DEP PR +C+R P+
Sbjct: 506 YTSEDEPYPRGEICVRGPT 524
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 570 RRPVDVYRKQDEPCPRSRVCLRNPSCLSTRSSSAPQTVRAGGSPR 436
RR R++ P PRSR R +T S VR GSPR
Sbjct: 238 RRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPR 282
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 213 TKMENKVTVVLGAQWGDEGKGKVVDLLAVDSDIVCRCQGGNNAGHT 350
TK++ LG D G+G + ++ + +D + QGG AG T
Sbjct: 1071 TKVKQMTAFALGQLCDDGGEGLLDNVRVIQADTLSMIQGGWTAGST 1116
>12_01_0158 - 1199788-1200590,1200724-1200856
Length = 311
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 627 RCPFSWCRASSYPSQLPGDRRPVDVYRKQDEPCP 526
R PF+ C +SSY S + + +D + K + P P
Sbjct: 162 RSPFADCPSSSYASSMDNISKLLDGFMKTNSPSP 195
>11_01_0159 - 1318825-1319618,1319722-1319854
Length = 308
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 627 RCPFSWCRASSYPSQLPGDRRPVDVYRKQDEPCP 526
R PF+ C +SSY S + + +D + K + P P
Sbjct: 162 RSPFADCPSSSYASSMDNISKLLDGFMKTNSPSP 195
>08_02_1012 + 23550314-23551504
Length = 396
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 601 RSAPRKRASDRPTPRRQPETASESAICSETSVCSKTNTGXLXASYK 738
R P + A +PTP RQ E E+A T+ S N SY+
Sbjct: 197 RGRPPRAAKPQPTPERQQEAEVEAAATFWTACPSCCNLHEYTRSYE 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,919,396
Number of Sequences: 37544
Number of extensions: 611695
Number of successful extensions: 1771
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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