Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_E01
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical pr... 215 5e-56
U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical pr... 209 2e-54
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 34 0.16
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 4.6
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 4.6
AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical ... 29 4.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 6.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 6.1
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 6.1
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 6.1
Z49128-3|CAA88958.2| 855|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U88315-1|AAM29668.1| 457|Caenorhabditis elegans Hypothetical
protein C37H5.6a protein.
Length = 457
Score = 215 bits (524), Expect = 5e-56
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Frame = +3
Query: 141 MVTTVNSINTEINGELSRSCPSKKTKMENKVTVVLGAQWGDEGKGKVVDLLAVDS--DIV 314
M + + N E+ L++ T V+V+LGAQWGDEGKGK++D L + ++
Sbjct: 1 MGSVTSKTNDELESFLNKRLGGSMTSSNKTVSVLLGAQWGDEGKGKIIDYLIENHKINVT 60
Query: 315 CRCQGGNNAGHTVVVDGKEFDFHLLPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKG 494
RCQGGNNAGHTVV +G+++DFH+LPSGII+ C +VIGNGVV++L F EL N +
Sbjct: 61 ARCQGGNNAGHTVVANGRKYDFHILPSGIISPTCFNVIGNGVVVNLDAFFSELAHNGILE 120
Query: 495 MKGCEGRLVISDRAHLVFDIHQQVDGLQE-AEKGKNSLGTTKKGIGPAYSAKATRNGIRI 671
G E R++IS AHLVF +H QVDG QE + KN +GTT +GIGP YS+K RNGIR+
Sbjct: 121 ESGWEKRIMISSEAHLVFGVHSQVDGRQEDSLAAKNKIGTTNRGIGPTYSSKCFRNGIRV 180
Query: 672 GDLLGDFSLFEDKYRXLXGLVQTHVPGIGV 761
DL+ DF F +KYR L + P I V
Sbjct: 181 ADLMADFEEFSEKYRRLVEHYKKQFPSIEV 210
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 721 LXASYKRMFPALELNIDSELSKYRAYADLVR--PMVKDTVSYLHRXIXSGKEGAXXXNXC 894
L YK+ FP++E+N+D EL+K++ + + + +V DTV ++H +GK+
Sbjct: 197 LVEHYKKQFPSIEVNVDEELAKFKQHREKLAELKLVGDTVGFIHEQRNAGKQVLVEGANG 256
Query: 895 PMLDI 909
+LDI
Sbjct: 257 ALLDI 261
>U88315-2|AAB42370.2| 434|Caenorhabditis elegans Hypothetical
protein C37H5.6b protein.
Length = 434
Score = 209 bits (510), Expect = 2e-54
Identities = 99/186 (53%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Frame = +3
Query: 213 TKMENKVTVVLGAQWGDEGKGKVVDLLAVDS--DIVCRCQGGNNAGHTVVVDGKEFDFHL 386
T V+V+LGAQWGDEGKGK++D L + ++ RCQGGNNAGHTVV +G+++DFH+
Sbjct: 2 TSSNKTVSVLLGAQWGDEGKGKIIDYLIENHKINVTARCQGGNNAGHTVVANGRKYDFHI 61
Query: 387 LPSGIINQKCTSVIGNGVVIHLPGLFEELKKNELKGMKGCEGRLVISDRAHLVFDIHQQV 566
LPSGII+ C +VIGNGVV++L F EL N + G E R++IS AHLVF +H QV
Sbjct: 62 LPSGIISPTCFNVIGNGVVVNLDAFFSELAHNGILEESGWEKRIMISSEAHLVFGVHSQV 121
Query: 567 DGLQE-AEKGKNSLGTTKKGIGPAYSAKATRNGIRIGDLLGDFSLFEDKYRXLXGLVQTH 743
DG QE + KN +GTT +GIGP YS+K RNGIR+ DL+ DF F +KYR L +
Sbjct: 122 DGRQEDSLAAKNKIGTTNRGIGPTYSSKCFRNGIRVADLMADFEEFSEKYRRLVEHYKKQ 181
Query: 744 VPGIGV 761
P I V
Sbjct: 182 FPSIEV 187
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 721 LXASYKRMFPALELNIDSELSKYRAYADLVR--PMVKDTVSYLHRXIXSGKEGAXXXNXC 894
L YK+ FP++E+N+D EL+K++ + + + +V DTV ++H +GK+
Sbjct: 174 LVEHYKKQFPSIEVNVDEELAKFKQHREKLAELKLVGDTVGFIHEQRNAGKQVLVEGANG 233
Query: 895 PMLDI 909
+LDI
Sbjct: 234 ALLDI 238
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -3
Query: 648 PSRSRPVRCPFSWCRASSYPSQLPGDRRPVDVYRKQDEPCPRSRVCLRNPSCLS 487
PS RP CP SSYP ++ PVD Y +D +C P C+S
Sbjct: 394 PSEIRPT-CPVGEPHESSYPPDYGCNKCPVDYYCHRDSVATEKSICCPKP-CVS 445
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 559 NRSTVSRKLRRVRTRSAP-RKRASDRPTPRRQPETASESAICSETSVCSKTNTGXLXASY 735
+RST+++++R RTRSA K R RR P S SA S + S+T + Y
Sbjct: 96 SRSTMNQQIRLARTRSASGGKLRRSRSARRRSP---SSSASRSRSRSTSRTRAQSIPIRY 152
Query: 736 K 738
+
Sbjct: 153 R 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 559 NRSTVSRKLRRVRTRSAP-RKRASDRPTPRRQPETASESAICSETSVCSKTNTGXLXASY 735
+RST+++++R RTRSA K R RR P S SA S + S+T + Y
Sbjct: 96 SRSTMNQQIRLARTRSASGGKLRRSRSARRRSP---SSSASRSRSRSTSRTRAQSIPIRY 152
Query: 736 K 738
+
Sbjct: 153 R 153
>AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical
protein Y44E3B.2 protein.
Length = 392
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 261 RPTEHPKQQLLCFPFW 214
R TE+PK CFPFW
Sbjct: 261 RKTEYPKSDERCFPFW 276
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -2
Query: 331 PP*QRQTMSESTASKSTTFPLPSSPH*APKTTVTLFSILVFFDGHERDNSPLISVLIE 158
P Q+ E + P+PS H +TT T +FD HE PL+S IE
Sbjct: 3310 PHASEQSQIEEEHERFEESPVPSEKHHVTETTTTTTVTREYFDEHE----PLVSQEIE 3363
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -2
Query: 331 PP*QRQTMSESTASKSTTFPLPSSPH*APKTTVTLFSILVFFDGHERDNSPLISVLIE 158
P Q+ E + P+PS H +TT T +FD HE PL+S IE
Sbjct: 3310 PHASEQSQIEEEHERFEESPVPSEKHHVTETTTTTTVTREYFDEHE----PLVSQEIE 3363
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 423 QTCTSG**CHLATDGSQILCRQLPLCVQRCSRPDN 319
Q C +G CH+ +C P V RC +P N
Sbjct: 341 QGCGTGSYCHVGAQTQTTVCCPKPAAVDRCQQPLN 375
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 423 QTCTSG**CHLATDGSQILCRQLPLCVQRCSRPDN 319
Q C +G CH+ +C P V RC +P N
Sbjct: 341 QGCGTGSYCHVGAQTQTTVCCPKPAAVDRCQQPLN 375
>Z49128-3|CAA88958.2| 855|Caenorhabditis elegans Hypothetical protein
M03C11.3 protein.
Length = 855
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +1
Query: 568 TVSRKLRRVRTRSAPR-KRASDRPTPRRQPETASESAICSETSVCSKTNTGXLXASYK-R 741
TV++K ++ R KR +D+ RQP S +A + +S + N G +
Sbjct: 745 TVAKKHHKLMHAERERIKRETDKRIRNRQPAQKSAAATPAHSSSFAVPNAGEVEDDEDGN 804
Query: 742 MFPALELN---IDSELSKYRAYADLVRPMVKDTVSYLHR 849
+P ++N +D+ + R +A + +P + HR
Sbjct: 805 QYPPFDMNQFELDAAVVSRRRFASVEKPFEQRDFLNNHR 843
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,384,321
Number of Sequences: 27780
Number of extensions: 495256
Number of successful extensions: 1556
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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