Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D24
(928 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 40 0.010
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 40 0.010
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 40 0.010
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 40 0.010
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 40 0.010
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 40 0.010
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 40 0.010
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 38 0.052
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 38 0.052
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 38 0.052
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 38 0.052
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 31 4.5
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 71 PLTTESAMKK 80
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 40.3 bits (90), Expect = 0.010
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG H + +KIR S FRR KT PRK + + ++I
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E+A KK
Sbjct: 80 PLTTESAMKK 89
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 37.9 bits (84), Expect = 0.052
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFEP-LXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG HG + +KIR S F+R KT PRK + + ++I
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E A KK
Sbjct: 80 PLTTEFAMKK 89
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 37.9 bits (84), Expect = 0.052
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFEP-LXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG HG + +KIR S F+R KT PRK + + ++I
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E A KK
Sbjct: 80 PLTTEFAMKK 89
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 37.9 bits (84), Expect = 0.052
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFEP-LXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG HG + +KIR S F+R KT PRK + + ++I
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E A KK
Sbjct: 80 PLTTEFAMKK 89
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 37.9 bits (84), Expect = 0.052
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFEP-LXT*IPRKXCLXXSHGCYTSLI-- 881
KALKA+ V+KG HG + +KIR S F+R KT PRK + + ++I
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 882 PLTXEAA*KK 911
PLT E A KK
Sbjct: 80 PLTTEFAMKK 89
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 711 KALKAQXKVVKGEHGKRVRKIRNSVHFRRXKT 806
KALKA+ +KG H +K R S+ F+R KT
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKT 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,490,606
Number of Sequences: 237096
Number of extensions: 994823
Number of successful extensions: 1960
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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