Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_D24
         (928 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    48   2e-05
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    48   2e-05
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    47   3e-05
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    42   0.002

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 714 ALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI--P 884
           A K Q K++KG  G R RKIR +VHFRR  T + P     PRK     +     ++I  P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 885 LTXEAA*KK 911
           LT EAA KK
Sbjct: 194 LTTEAAMKK 202


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 714 ALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI--P 884
           A K Q K++KG  G R RKIR +VHFRR  T + P     PRK     +     ++I  P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 885 LTXEAA*KK 911
           LT EAA KK
Sbjct: 202 LTTEAAMKK 210


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 714 ALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI--P 884
           A K Q K++KG  G R RKIR +VHFRR  T + P     PRK     +     ++I  P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 885 LTXEAA*KK 911
           LT EAA KK
Sbjct: 202 LTTEAAMKK 210


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = +3

Query: 714 ALKAQXKVVKGEHGKRVRKIRNSVHFRRXKTFE-PLXT*IPRKXCLXXSHGCYTSLI--P 884
           A K Q K++K   G R RKIR +VHFRR  T + P     PRK     +     ++I  P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 885 LTXEAA*KK 911
           LT EAA KK
Sbjct: 194 LTTEAAMKK 202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,350,341
Number of Sequences: 53049
Number of extensions: 279035
Number of successful extensions: 785
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)