Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_D23
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-5|AAN65330.1|  374|Caenorhabditis elegans Hypothetical pr...    87   2e-17
AL032637-12|CAA21614.1|  338|Caenorhabditis elegans Hypothetical...    84   1e-16
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    30   2.6  
AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z78536-2|CAB01716.1|  363|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>U23139-5|AAN65330.1|  374|Caenorhabditis elegans Hypothetical
           protein F13H8.3 protein.
          Length = 374

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
 Frame = +1

Query: 127 CCVSATTNRPKYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINN 306
           C VS  T   K IID D   DD   + IA+ ++      E+IA+TT HG     Q   N 
Sbjct: 16  CSVSRPT--VKLIIDTDGVYDDIRGLTIALTNQNV----EVIAITTVHGGVTANQSAANV 69

Query: 307 QQILKLAGRQDIPIYRGSAEALVSPFG--NVW--YYGLDGLGDNNDSYTDLFPPAEESA- 471
            ++L+  G+ ++P++ G+ ++LV P G   VW   +G DG+G   D      P    SA 
Sbjct: 70  ARLLRAIGKHNVPVFIGAQDSLV-PKGPIQVWEELFGSDGIGGVPDVEPKTLPSDFNSAQ 128

Query: 472 ---AFALIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHL------YIGAGHLY 624
              A   I N  K    + +V +G LTNIA+A++ DP    R+  +      Y+G G+  
Sbjct: 129 VGNAVDAIINLTKSTKDIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLGVGN-- 186

Query: 625 SKEXPKPEFNALMDVEAYHVVM 690
           ++     EFN LMD EA H+V+
Sbjct: 187 TQFNSTAEFNFLMDPEAAHIVL 208


>AL032637-12|CAA21614.1|  338|Caenorhabditis elegans Hypothetical
           protein Y43F8C.13 protein.
          Length = 338

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 60/207 (28%), Positives = 112/207 (54%), Gaps = 11/207 (5%)
 Frame = +1

Query: 142 TTNRPKYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINNQQILK 321
           T ++ K +ID+D   DD  AI +A+   K     E++A T  HG    +Q   N ++ ++
Sbjct: 2   TVDKVKLVIDSDGVSDDVRAISLALQHPK----AEILAFTAVHGCVTVDQACANIKRTIR 57

Query: 322 LAGRQDIPIYRGSAEALVS-PFGNVW--YYGLDGLGDNNDSYTDL----FPPAEESAAFA 480
              R +IP+Y+G+A++++S P  +    ++G+DG+GD  + +  +    F    + A+ A
Sbjct: 58  ANDRSNIPVYKGAAKSILSLPKDDTVSDFFGIDGIGDKPEEFPKVERSDFEGEGKHASLA 117

Query: 481 LIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYIGAGHLYS----KEXPKPE 648
           LI+  ++   + ++VTIG LTN+A+A++   +F    S L I  G+ Y+          E
Sbjct: 118 LIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDGGSSAE 176

Query: 649 FNALMDVEAYHVVMQKADPEKVTILPF 729
           +N   D EA  +V+++     +TI+P+
Sbjct: 177 YNFHGDPEAASIVLRRMKC-PITIVPW 202


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
            protein Y71F9AL.17 protein.
          Length = 1232

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 274  NTDEEQVTINNQQILKLAGRQDIPIYRGSAEALVSPFGNVWYYGLDG 414
            NTD  Q+T +      +  RQ +P+YRG         G  +  GL+G
Sbjct: 1161 NTDAHQLTYDEHNPFVVCSRQFVPLYRGRPLCKCPYCGASYSEGLEG 1207


>AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical
           protein Y52D5A.2 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 693 LHHHMIGLYVHQGVEFGFWXFFAIQMSRSYIQMRKAV 583
           + +H+I L+V+ GV FG      +Q  RSY+ +R+A+
Sbjct: 26  IRNHLINLHVYHGVLFGSEVEKILQWDRSYL-VRRAI 61


>Z78536-2|CAB01716.1|  363|Caenorhabditis elegans Hypothetical
           protein C07A4.3 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 481 LIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYI 606
           L +NS+K    +SV   GT+ ++ V +KYDP    + S  Y+
Sbjct: 305 LWKNSRKIGVGVSVAKRGTMYHVYVCIKYDPPGNMQTSEAYM 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,847,117
Number of Sequences: 27780
Number of extensions: 427065
Number of successful extensions: 932
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)