Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D22
(904 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 34 0.032
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.22
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 30 0.39
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 1.6
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 3.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 4.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 4.8
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 6.4
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 8.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 8.4
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 8.4
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +3
Query: 462 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 632
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 633 DVDVGLETAQKTNEIAKAVEAXTYAVNIRDDAEFLPI 743
DVD+ LET +K ++ E Y N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -1
Query: 730 SASSLMLTAYVXASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 551
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 550 LLLSS 536
SS
Sbjct: 315 SSFSS 319
Score = 25.8 bits (54), Expect = 8.4
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -1
Query: 691 STAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGL----LLSSGCFC 524
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 523 FSGKVIFNTSFS*TQLPSEFTS 458
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 219 SLWSNLANEMQHLDDMMKELSLKFPSIINEGRV 317
+L S L LDD+ K L+L FP++I + RV
Sbjct: 167 ALQSQLVRVNGELDDLQKHLTLSFPTLIAKSRV 199
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -1
Query: 715 MLTAYVXASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 542
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 694 ASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGC----F 527
AS +F+ S + W S+T S N+ G+ A GLL GC F
Sbjct: 343 ASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGLLTPIGCSPKKF 402
Query: 526 CFSGKVIFNTSFS 488
FS +V FN S S
Sbjct: 403 AFS-EVPFNDSNS 414
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 198 ESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 377
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 378 VKAKN 392
K N
Sbjct: 163 SKKLN 167
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 110 AAVSAAPQYYHGSSHWPYHHYDPXQSL 190
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -1
Query: 748 YGIGKNSASSLMLTAYVXASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVS 569
Y + ++S +S++ AY+ S + S V ++ PTS+S + V S+ R + G S
Sbjct: 387 YSVVQSSLASIISNAYIATSKSGLNSGVSTLLASPTSSS----TFVTSLLRRSSIDGSAS 442
Query: 568 VGSAT 554
SA+
Sbjct: 443 SSSAS 447
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 486 YEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQK 665
Y V ++ P Q + + +ET P+ S E F T S + + E
Sbjct: 986 YTSAVTELPDPNHQLEMSTTTHVQHPNSETIPS--STENQYFDTTSGAFEANSNTEVTVN 1043
Query: 666 TNEIAKAVEAXTYAVNIRDDAEFLPI 743
+NE+++ + T + DD E LP+
Sbjct: 1044 SNEVSQPFDFDTANESDNDDDE-LPV 1068
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 8.4
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +3
Query: 216 HSLWSNLANEMQHLDD--MMKELSL-KFPSI-INEGRVEGDKYQISIHLPGY---EQKDI 374
H++ N A E ++D ++K +S F S+ + + R GD + I I + + I
Sbjct: 573 HTIVPNSAPEHPSINDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVI 632
Query: 375 NVKAKNGVLMVQANSAF 425
NV+A+ +LM Q S F
Sbjct: 633 NVRAERAILMSQGESPF 649
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = -1
Query: 733 NSASSLMLTAYVXASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSAT 554
NS++ + ++ + +STA A S + + + TS+S +L+ ISS V +GS++
Sbjct: 3439 NSSTPITSSSVLNSSTAIASSSILNSSTPITSSS--VLNSSTPISSSTVITSSVVIGSSS 3496
Query: 553 GLLLSS 536
L +S
Sbjct: 3497 VLSYAS 3502
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 29 KPLRXXFFESCLNAPRE*PP*KFCGLLAAVSAAPQYYHGSSHWPYHHYDPXQSLRSGKHV 208
KP F+ CL P+ P ++ G V +P Y+GS ++ D L+ H
Sbjct: 136 KPTSSDFYIPCLIKPKIITPFEWEGNFKQVIYSPTVYNGSFKRLFYLPDNNDLLKEFAHA 195
Query: 209 GHT 217
+T
Sbjct: 196 TNT 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,231,472
Number of Sequences: 5004
Number of extensions: 64144
Number of successful extensions: 211
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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