BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D18
(847 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 37 2e-04
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 37 2e-04
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 34 0.002
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 34 0.002
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 25 0.66
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 25 0.66
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 25 0.66
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.2
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 137 LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPCXAVSGDSKXN 307
+CF L V+ ++ Y+++ D++DI+ ++ L A++ C L PC + + K N
Sbjct: 11 VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRN 66
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 137 LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPCXAVSGDSKXN 307
+CF L V+ ++ Y+++ D++DI+ ++ L A++ C L PC + + K N
Sbjct: 11 VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRN 66
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 131 YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPC 277
Y+L F L + C E Y+++ DD+DI+ ++ N L +I C L PC
Sbjct: 4 YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 131 YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPC 277
Y+L F L + C E Y+++ DD+DI+ ++ N L +I C L PC
Sbjct: 4 YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.66
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 134 VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPCXAVSGDS 298
++C L AA+ E+Y+S+ D+++++ ++ + L + C + C A +
Sbjct: 5 IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64
Query: 299 K 301
K
Sbjct: 65 K 65
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.66
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 134 VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPCXAVSGDS 298
++C L AA+ E+Y+S+ D+++++ ++ + L + C + C A +
Sbjct: 5 IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64
Query: 299 K 301
K
Sbjct: 65 K 65
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 25.4 bits (53), Expect = 0.66
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 134 VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLXAFIGCFLKTFPCXAVSGDS 298
++C L AA+ E+Y+S+ D+++++ ++ + L + C + C A +
Sbjct: 5 IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64
Query: 299 K 301
K
Sbjct: 65 K 65
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = -3
Query: 239 SENQYFPPKLQYPDRHFPSCMSLYSRQQRTVQNTARRNPSS*IIV 105
+++ FPP + +H + Q +QNT +N I++
Sbjct: 150 TQSVIFPPVYEILPQHHLDSRVIQEAQNIAIQNTQGKNNQQNILI 194
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -2
Query: 114 NYSLQLIRKIILYSAHAELLNQESXLKEF 28
N ++++ +L HA L++Q++ KE+
Sbjct: 208 NQEYEIMKDNLLLYNHARLMSQDNHSKEY 236
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,144
Number of Sequences: 438
Number of extensions: 1996
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -