Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_D14
         (1015 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical pr...    29   7.0  
Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical pr...    29   7.0  
Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical pr...    29   7.0  

>Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.6 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +1

Query: 52  PFKEX*QGSAFXPGXPEPMXXLG-PGIFXXG---GLXGPSXPQVXPG 180
           P K   QG A  PG P P    G PG    G   G  GP+ P+  PG
Sbjct: 149 PCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195


>Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.5 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +1

Query: 52  PFKEX*QGSAFXPGXPEPMXXLG-PGIFXXG---GLXGPSXPQVXPG 180
           P K   QG A  PG P P    G PG    G   G  GP+ P+  PG
Sbjct: 149 PCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195


>Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.1 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +1

Query: 52  PFKEX*QGSAFXPGXPEPMXXLG-PGIFXXG---GLXGPSXPQVXPG 180
           P K   QG A  PG P P    G PG    G   G  GP+ P+  PG
Sbjct: 149 PCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPG 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,460,207
Number of Sequences: 27780
Number of extensions: 249946
Number of successful extensions: 6491
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)