Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D13
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 131 3e-30
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 131 3e-30
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 131 3e-30
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 131 3e-30
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 131 3e-30
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 131 3e-30
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 128 3e-29
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 82 3e-15
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 32 3.3
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 131 bits (317), Expect = 3e-30
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 128 bits (309), Expect = 3e-29
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = +2
Query: 326 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 505
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRA GRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRARGRINPYMS 141
Query: 506 SPCHIEVCLSEREDAVAR 559
SPCHIE+ L+E+E V +
Sbjct: 142 SPCHIEMILTEKEQIVPK 159
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +1
Query: 151 VHFKHTXAPAMAIRXLPLRRAVRYLKNVIEKKXCIPFRRFNGGVGRCAQAKQFGTTQG 324
VHFK+T A AI+ + +R+A +YLK+V +K C+PFRR+NGGVGRCAQAKQ+G TQG
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQG 81
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 87 RYSRAPXHPAQSCKARGSNLR 149
RYS P +P +SCK+RGSNLR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLR 23
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 81.8 bits (193), Expect = 3e-15
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 296 KQSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 475
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Query: 476 AHGRINPYMSSPCHIEVCLSER 541
AHG+INPY++S CHIE+ L+E+
Sbjct: 68 AHGQINPYVTSACHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.9 bits (69), Expect = 3.3
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 406 RGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 546
R +S R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 89 RACSSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,374,480
Number of Sequences: 237096
Number of extensions: 1754796
Number of successful extensions: 7496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7496
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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