Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_D07
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450...    33   0.40 
12_01_0731 - 6516894-6517473,6517485-6519574                           30   2.1  
10_08_0870 - 21178136-21178534                                         30   2.1  
09_02_0327 - 7284829-7284889,7284946-7286126                           30   2.1  

>09_02_0121 +
           4502628-4502696,4503727-4503829,4504205-4504328,
           4505963-4506306,4506383-4506487,4507907-4508288,
           4509173-4509437,4509936-4510094,4511150-4511201,
           4511266-4511462,4512865-4513350,4513797-4514093
          Length = 860

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -2

Query: 346 VEPATVIPKGCEVGELQSLMPAQTAQVQKVELQHLHLPLPKWTATLFCFLSILECWWT 173
           + P T      + G L S+MP QT   Q+  LQ L+LP          FLS+    W+
Sbjct: 490 ISPFTASGAAIKYGNL-SVMPTQTGHAQEARLQQLNLPHAMEILIAVSFLSLFLVIWS 546


>12_01_0731 - 6516894-6517473,6517485-6519574
          Length = 889

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = +2

Query: 248 LELYFLHLSSLCRHQALKLTHLTTLGNHSGWFNSLXHASVRXGYEXLQNKSA 403
           L LY  H S +   Q L LTHL  L  HS   N+L        Y  +QN SA
Sbjct: 435 LALYNCHFSGVIAPQILNLTHLQYLLLHS---NNLVGTVELSSYSKMQNLSA 483


>10_08_0870 - 21178136-21178534
          Length = 132

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 287 ACTDCSSAKSRAPTPPPTTP 228
           AC DC S K  AP P P TP
Sbjct: 21  ACPDCPSPKPPAPRPKPPTP 40


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 272 SSAKSRAPTPPPTTPKVDSHTFLFFV 195
           +S  SR P PPP  P +  H FLF +
Sbjct: 138 ASGDSRNPPPPPRRPAIVLHAFLFLL 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,602,408
Number of Sequences: 37544
Number of extensions: 379138
Number of successful extensions: 1266
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)