Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_D07
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...    36   0.039
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score = 35.9 bits (79), Expect = 0.039
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +1

Query: 256 LLFALEQSVQASGSEAHPPHNPWESQWLVQLPGXR*CPSGL*XFTKQVCKACXSLXYI 429
           L++ALE SV ASG   HP   PW                G   + KQVC AC S+ ++
Sbjct: 27  LVYALENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVY-KQVCAACHSMKFL 83


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 272 SSAKSRAPTPPPTTPKVDS 216
           SS++SR+P PPP  P+ DS
Sbjct: 508 SSSRSRSPPPPPRRPRQDS 526


>Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical
           protein F35B12.6 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 293 PDACTDCSSAKSRAPTPPPTTPKVDSH 213
           PD  +D S+ +S +P  PP  P+ D H
Sbjct: 84  PDTISDDSADQSGSPNSPPFVPQGDGH 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,530,512
Number of Sequences: 27780
Number of extensions: 309780
Number of successful extensions: 771
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)