Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D05
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 295 2e-80
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 295 2e-80
U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF067219-12|AAC17033.2| 162|Caenorhabditis elegans Hypothetical... 37 0.024
Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical p... 29 6.2
Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm rece... 28 8.2
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 295 bits (725), Expect = 2e-80
Identities = 140/241 (58%), Positives = 176/241 (73%), Gaps = 7/241 (2%)
Frame = +2
Query: 182 LRVAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDKGNREDPLATIAAQNGKPVYKYKSWR 361
+++AIIGQS F +V+K ++++GHE+V VFTIPDK RED LA AA++G PV K WR
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLAVEAAKDGVPVQKPSRWR 60
Query: 362 IKG------QVIPEVLEQYKSVNADLNVLPFCTQFIPMEVITAPKYESICYHPSILPRHR 523
K + +PE+LE YKS A+LNVLPFCTQFIP+E+ AP +SI YHPSILP+HR
Sbjct: 61 KKNPETGKFETLPEMLELYKSFGAELNVLPFCTQFIPLEITEAPAKKSIIYHPSILPKHR 120
Query: 524 GASSVNWTLIEGDTTCGFSIFWADDGLDTGPILLQKSYPTTIDDTVDTIYNKFLYPEGIK 703
GAS++NWTLIEGD G SIFWADDGLDTGPILLQK +DT++T+Y +FLYP G+
Sbjct: 121 GASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYKRFLYPAGVA 180
Query: 704 ALAEAVNMVANGVAPKIKQSEEGATYXPAL-FKPETHLIDWSKGGLALHNFVRXLDSSPG 880
A+AE+V ++A G AP+I Q EEGA+Y P + KPE IDWSK LHNF+R D PG
Sbjct: 181 AVAESVELIATGKAPRIVQPEEGASYEPYITTKPELAQIDWSKTQRQLHNFIRGNDKVPG 240
Query: 881 A 883
A
Sbjct: 241 A 241
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 295 bits (725), Expect = 2e-80
Identities = 140/241 (58%), Positives = 176/241 (73%), Gaps = 7/241 (2%)
Frame = +2
Query: 182 LRVAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDKGNREDPLATIAAQNGKPVYKYKSWR 361
+++AIIGQS F +V+K ++++GHE+V VFTIPDK RED LA AA++G PV K WR
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLAVEAAKDGVPVQKPSRWR 60
Query: 362 IKG------QVIPEVLEQYKSVNADLNVLPFCTQFIPMEVITAPKYESICYHPSILPRHR 523
K + +PE+LE YKS A+LNVLPFCTQFIP+E+ AP +SI YHPSILP+HR
Sbjct: 61 KKNPETGKFETLPEMLELYKSFGAELNVLPFCTQFIPLEITEAPAKKSIIYHPSILPKHR 120
Query: 524 GASSVNWTLIEGDTTCGFSIFWADDGLDTGPILLQKSYPTTIDDTVDTIYNKFLYPEGIK 703
GAS++NWTLIEGD G SIFWADDGLDTGPILLQK +DT++T+Y +FLYP G+
Sbjct: 121 GASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYKRFLYPAGVA 180
Query: 704 ALAEAVNMVANGVAPKIKQSEEGATYXPAL-FKPETHLIDWSKGGLALHNFVRXLDSSPG 880
A+AE+V ++A G AP+I Q EEGA+Y P + KPE IDWSK LHNF+R D PG
Sbjct: 181 AVAESVELIATGKAPRIVQPEEGASYEPYITTKPELAQIDWSKTQRQLHNFIRGNDKVPG 240
Query: 881 A 883
A
Sbjct: 241 A 241
>U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical protein
F38B6.4 protein.
Length = 974
Score = 46.4 bits (105), Expect = 3e-05
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Frame = +2
Query: 173 KKSLRVAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDKGNREDPLA-TIAAQNGKP--VY 343
+K +RVAI+ T + KLI+R + N+E TIAA G P V
Sbjct: 783 RKRVRVAILISGT-GTNMQKLIERSKTPDSNCDVVLVVSNKEGAGGLTIAASYGIPTKVV 841
Query: 344 KYKSWRIKGQVIPEVLEQYKSVNADLNVLPFCTQFIPMEVITAPKYESICYHPSILPRHR 523
+ + R+ G E+ + K +L L + + I+ I HPS+LP +
Sbjct: 842 PHTADRVTGDT--ELAQVLKDFGTELVCLGGYMRILSPCFISQFPSRIINIHPSLLPAFK 899
Query: 524 GASSVNWTLIEGDTTCGFSIFWADDGLDTGPILLQKSYPTTIDDTVDTIYNKFLYPE 694
GA ++ L G G + + D+ +D G I+ Q+ DT++T+ K E
Sbjct: 900 GAHALQDALNFGVRIVGCTAHFVDELVDHGDIIAQRPVVVEDTDTIETVRQKIQLQE 956
>AF067219-12|AAC17033.2| 162|Caenorhabditis elegans Hypothetical
protein R12E2.12 protein.
Length = 162
Score = 36.7 bits (81), Expect = 0.024
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 188 VAIIGQSTFAAEVFKLIQRDGHEVVGVFTIPDK----GNREDPLATIAAQNGKPVYKYKS 355
V++I +S A++ K + R G+ ++ + +K G+R+ P +A Q +PVY
Sbjct: 6 VSMITRSLSKADLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYKRLAKQTNEPVYASNF 65
Query: 356 WRIKGQVIPEVLEQYKSV-NADLNVLPFCTQFIPMEVITAPKYE 484
+ K + E ++ KS+ DL+ + I ++ + APK E
Sbjct: 66 FLFKAHMSREARQKTKSILTHDLDTVQ--VDLIQVDTLPAPKVE 107
>Z81586-1|CAB04690.1| 579|Caenorhabditis elegans Hypothetical
protein T05F1.2 protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 186 ELPLLAKVHLQLKFSNSSKETVMKLW 263
+LP+L K++ KFS + KET+ LW
Sbjct: 43 DLPILDKINYLEKFSENEKETLKGLW 68
>Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 834 PPLLQSIR*VSGLNRAGS*VAPSSDCLILGATPFATMLTASARALIPSGYKNLL 673
P +L S R +GLN GS + S +LG + T + + R L+ Y + L
Sbjct: 118 PVILVSTRKFAGLNTLGSLLLLLSFAFLLGPKSYLTHMASPQRRLVTVSYLSAL 171
>Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 834 PPLLQSIR*VSGLNRAGS*VAPSSDCLILGATPFATMLTASARALIPSGYKNLL 673
P +L S R +GLN GS + S +LG + T + + R L+ Y + L
Sbjct: 118 PVILVSTRKFAGLNTLGSLLLLLSFAFLLGPKSYLTHMASPQRRLVTVSYLSAL 171
>AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm
receptor protein 208 protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 536 VNWTLIEGDTTCGFSIFWADDGLDTGPILLQKSYPTTIDDTVDTIYNKF 682
+N + G TT +IF A D L T +++ +SY I +++ +I+N F
Sbjct: 279 INIGSLTGITTITTAIFPALDPLPT--LIIVRSYRNAIRESISSIFNSF 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,120,867
Number of Sequences: 27780
Number of extensions: 470854
Number of successful extensions: 1071
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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