Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D04
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0195 - 14098865-14099083,14100209-14100352,14101820-141018... 62 8e-10
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301... 31 0.97
03_04_0066 + 17003276-17004067 31 1.7
01_06_0097 + 26413647-26415101 30 2.3
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 30 3.0
05_05_0152 + 22762994-22763326,22763857-22763989,22764281-227643... 30 3.0
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 29 3.9
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 29 3.9
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 29 5.2
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 29 5.2
02_05_0433 - 28939817-28940146 29 5.2
02_01_0305 + 2041370-2043114,2043764-2044121 29 6.9
01_04_0139 - 16570515-16571141 29 6.9
09_06_0058 - 20579518-20580174 28 9.1
>08_02_0195 -
14098865-14099083,14100209-14100352,14101820-14101833,
14101919-14102006,14102303-14102426,14102959-14103068,
14103142-14103348,14103441-14103568,14103781-14103892,
14105678-14105695,14105917-14106109,14106274-14106359,
14106494-14106582,14106817-14106863,14107424-14107534,
14110252-14110318,14110419-14110509
Length = 615
Score = 61.7 bits (143), Expect = 8e-10
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Frame = +3
Query: 210 EKAPILLNLEIFRITRDSQQQHGLRHADYQXXXXXXXXXXXXXXXXXXXPQGDRRHYRRR 389
EK + ++ + + R++Q QHGLRH DY G R Y +R
Sbjct: 21 EKPLVRFSINVLELMREAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFLHG-RGKYTKR 79
Query: 390 DVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEANTEPRKKFHLVSRLKKACAHGQ 569
++T + +T + RL P ++ + + R +KA
Sbjct: 80 NITESTVT----DVRLFPSP-------------------SKSIYYYRHICRFRKAVKWAT 116
Query: 570 MLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAA-DSLQRARIVLEQLCTAL 746
+ LC G ++RT LEA AYAS+++G LL E ++ EAA + + R V E+L
Sbjct: 117 LFSHLCSLKG--DSRTSLEAEAYASYMKGTLLFEQEKNIEAAMTNFKNTRAVYEELGKYG 174
Query: 747 PADERIVYDQKLEELKPSLRYCA 815
+ +++ Q++EE++P + +C+
Sbjct: 175 SIENQLLCRQRIEEVEPMIGFCS 197
>08_02_1512 +
27627740-27629009,27629111-27629256,27629842-27630101,
27630346-27630412,27630511-27630545,27630818-27631587,
27631633-27631793
Length = 902
Score = 31.5 bits (68), Expect = 0.97
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 588 EESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQRARIVLEQLCTALPADE-RI 764
EE + E +E G +S L+ +L W + + ++L+QLC + ++ R+
Sbjct: 437 EEFLQFEEDKAMECGNLSSTLQ-----KLYMWEKKLLEEVKCWVILKQLCLSQTEEKMRV 491
Query: 765 VYDQKLEELK 794
+Y+QK EELK
Sbjct: 492 LYNQKREELK 501
>03_04_0066 + 17003276-17004067
Length = 263
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +1
Query: 589 RKAAGAKRVRC*R--RARTLLGCGACCCW 669
R+ G + VRC R R ++ CGACC W
Sbjct: 172 RRLQGVRVVRCGRCDEERWVVRCGACCAW 200
>01_06_0097 + 26413647-26415101
Length = 484
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 768 KQSVRPPARLYRVVRVRSWPVAMSP 694
+QS PPARL V R WPVA +P
Sbjct: 70 RQSRPPPARLKIAVFSRKWPVASAP 94
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 29.9 bits (64), Expect = 3.0
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +3
Query: 381 RRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEANTEPRKKFHLVSRLKKACA 560
R R T + + E L + ERA L ++ L + + ACA
Sbjct: 650 RERRAAETEVASRRREEALEARAMALEERACVVERDLADRKAAVAIREVTLAAH-EAACA 708
Query: 561 HGQMLLQLCEESGRCEARTVLEAGAYASWL-RGVLLLELQQWREAADSLQRAR 716
+ L+LCE++ R + EA A A L L E Q +A +L+ AR
Sbjct: 709 EEESALRLCEDTLTERERALEEAEAAAQKLAESASLREAAQEEQARRNLEGAR 761
>05_05_0152 +
22762994-22763326,22763857-22763989,22764281-22764362,
22764786-22764939,22765028-22765162
Length = 278
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 629 RL*HRTRFAPAAFLTKLQKHLPMCTCFLQSRHKMKLFSRFSVSFLTQ-LHGMSPCPLGLQ 453
R HR + P+ T+ ++H+ +C + H++ L SFL Q L+G+ PC
Sbjct: 170 RFCHRL-YRPSTVTTEYREHVKDLSCLSKDFHRIVLVDNNPYSFLLQPLNGI-PCLTFSA 227
Query: 452 QRYVQQSILGIV 417
+ V ++G++
Sbjct: 228 GQPVDDQLMGVI 239
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -2
Query: 605 APAAFLTKLQKHLPMCTCFLQSRHKMKLFSRFSVSFLTQLHGMSP-CPLGLQQRYVQQSI 429
A +FLT +++ MC FLQ R + R S + + + P QQ V SI
Sbjct: 137 ARISFLTPTSENMSMCKFFLQQRCRFGSNCRLSHGIVIPILSLKQFTPTRWQQSLVGSSI 196
Query: 428 LGIVGRKVG 402
L G G
Sbjct: 197 LAASGHHSG 205
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 739 VQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSCKSIC 566
+ + SST A C+ S ++ P +EA APA+ R PL + ++C
Sbjct: 35 LSTASSTSSASCSPSPLRTLAATDAATPPPEEEAAAPAAEAKRERLQPLQWPARDALC 92
>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Frame = +3
Query: 357 PQGDRRHYRRRDVTTTHLTA--NNAENRLL-----YI-----PLLQAERAWAHAMQLRQE 500
PQ D R+ ++ DV TH + ++ E++L+ YI + ++R WA RQE
Sbjct: 1351 PQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQE 1410
Query: 501 ANTEPRK 521
A ++ R+
Sbjct: 1411 AQSQNRR 1417
>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Frame = +3
Query: 357 PQGDRRHYRRRDVTTTHLTA--NNAENRLL-----YI-----PLLQAERAWAHAMQLRQE 500
PQ D R+ ++ DV TH + ++ E++L+ YI + ++R WA RQE
Sbjct: 1351 PQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQE 1410
Query: 501 ANTEPRK 521
A ++ R+
Sbjct: 1411 AQSQNRR 1417
>02_05_0433 - 28939817-28940146
Length = 109
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 675 QQWREAADSLQRARIVLEQLCTALPADERIVYDQKLE 785
QQWR++ +L+R R++LEQ R+ + + E
Sbjct: 54 QQWRQSMQALERERLMLEQAWMEREEQRRVREEARAE 90
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 754 SAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSCK 575
+A A + ++ A +AA+RH +SS++ A AP+S+ A+ SS S
Sbjct: 13 AAAAARHAAAAPSSAATLAAAAARHAAAASSSSAARHAAAAPSSAATLATAAAPSSSSAA 72
Query: 574 SICPCA 557
++ A
Sbjct: 73 TLAAAA 78
>01_04_0139 - 16570515-16571141
Length = 208
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 608 SAYGARGGRVRFLAAGRVAAGVATMARGSGLIATGQDR 721
SA GGR R+ G AAGV ARG G G+ R
Sbjct: 78 SAGDGDGGRRRWQRDGEAAAGVEAAARGDGDGVRGRRR 115
>09_06_0058 - 20579518-20580174
Length = 218
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = -1
Query: 813 HNNEDSAS------APLASDRKQSVRPPARLYRVVRVRSWPVAMSPL 691
HN D AS AS R + V PPA L V + R VAMSPL
Sbjct: 86 HNPSDRASLLYDGLVAYASYRGEPVMPPAPLPPVAQDRGADVAMSPL 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,747,403
Number of Sequences: 37544
Number of extensions: 484050
Number of successful extensions: 1672
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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