Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_D04
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens ... 195 2e-49
AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition part... 194 5e-49
BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein. 192 1e-48
BC030547-1|AAH30547.1| 647|Homo sapiens hypothetical protein DK... 33 1.1
BC018769-1|AAH18769.1| 556|Homo sapiens Unknown (protein for IM... 33 1.1
BC009436-1|AAH09436.1| 610|Homo sapiens Unknown (protein for IM... 33 1.1
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 33 1.5
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 31 4.5
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 31 4.5
DQ338460-1|ABC69298.1| 494|Homo sapiens putative RhoGAP protein... 31 7.8
BC114490-1|AAI14491.1| 494|Homo sapiens Rho GTPase activating p... 31 7.8
BC113888-1|AAI13889.1| 465|Homo sapiens ARHGAP19 protein protein. 31 7.8
AY336750-1|AAR02412.1| 517|Homo sapiens putative RhoGAP protein... 31 7.8
AL359385-3|CAI13731.2| 494|Homo sapiens Rho GTPase activating p... 31 7.8
AL359385-1|CAI13728.1| 485|Homo sapiens Rho GTPase activating p... 31 7.8
AK093316-1|BAC04130.1| 313|Homo sapiens protein ( Homo sapiens ... 31 7.8
AK074122-1|BAB84948.1| 196|Homo sapiens FLJ00194 protein protein. 31 7.8
>AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90217 fis, clone MAMMA1002234, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 627
Score = 195 bits (476), Expect = 2e-49
Identities = 100/248 (40%), Positives = 152/248 (61%)
Frame = +3
Query: 147 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQXXXXXXXXX 326
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRR 90
Query: 327 XXXXXXXXXXPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEAN 506
G+R + + VT LT +NR L + L+ AERAW++AMQL+QEAN
Sbjct: 91 QRRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEAN 146
Query: 507 TEPRKKFHLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWR 686
TEPRK+FHL+SRL+KA H + L +LCE S R +A+T LEA AY ++L G+L E Q+W+
Sbjct: 147 TEPRKRFHLLSRLRKAVKHAEELERLCE-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWK 205
Query: 687 EAADSLQRARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIXDESAAGDLWXCAV 866
A ++ + + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNI D+SA +L +
Sbjct: 206 AAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRL 265
Query: 867 KDSCTTSM 890
+ T +
Sbjct: 266 RSGGTEGL 273
>AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition
particle 68 protein.
Length = 619
Score = 194 bits (472), Expect = 5e-49
Identities = 99/248 (39%), Positives = 152/248 (61%)
Frame = +3
Query: 147 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQXXXXXXXXX 326
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 26 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRR 82
Query: 327 XXXXXXXXXXPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEAN 506
G+R + + VT LT +NR L + L+ AERAW++AMQL+QEAN
Sbjct: 83 QRRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEAN 138
Query: 507 TEPRKKFHLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWR 686
TEPRK+FHL+SRL+KA H + L +LC+ S R +A+T LEA AY ++L G+L E Q+W+
Sbjct: 139 TEPRKRFHLLSRLRKAVKHAEELERLCK-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWK 197
Query: 687 EAADSLQRARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIXDESAAGDLWXCAV 866
A ++ + + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNI D+SA +L +
Sbjct: 198 AAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRL 257
Query: 867 KDSCTTSM 890
+ T +
Sbjct: 258 RSGGTEGL 265
>BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein.
Length = 596
Score = 192 bits (469), Expect = 1e-48
Identities = 98/231 (42%), Positives = 146/231 (63%)
Frame = +3
Query: 147 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQXXXXXXXXX 326
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRR 90
Query: 327 XXXXXXXXXXPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEAN 506
G+R + + VT LT +NR L + L+ AERAW++AMQL+QEAN
Sbjct: 91 QRRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEAN 146
Query: 507 TEPRKKFHLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWR 686
TEPRK+FHL+SRL+KA H + L +LCE S R +A+T LEA AY ++L G+L E Q+W+
Sbjct: 147 TEPRKRFHLLSRLRKAVKHAEELERLCE-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWK 205
Query: 687 EAADSLQRARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIXDESA 839
A ++ + + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNI D+SA
Sbjct: 206 AAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSA 256
>BC030547-1|AAH30547.1| 647|Homo sapiens hypothetical protein
DKFZp434K1815 protein.
Length = 647
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 631 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 765
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 457 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 503
>BC018769-1|AAH18769.1| 556|Homo sapiens Unknown (protein for
IMAGE:4648757) protein.
Length = 556
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 631 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 765
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 366 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 412
>BC009436-1|AAH09436.1| 610|Homo sapiens Unknown (protein for
IMAGE:3502080) protein.
Length = 610
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 631 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 765
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 420 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 466
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -3
Query: 757 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 578
SS + S SS+ + + S++S SSSN+ S + +P+SS+ +S P SS S
Sbjct: 76 SSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSS 135
Query: 577 KS 572
S
Sbjct: 136 PS 137
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = -3
Query: 757 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 578
SS+ + S S+ + + S++S +SSS++ S + +P+SS+ +S P SS S
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 153
Query: 577 KS 572
S
Sbjct: 154 PS 155
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -3
Query: 757 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 578
SS+ + SS+ + + S++S SSSN+ S + +P+SS+ +S P SS S
Sbjct: 75 SSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSS 134
Query: 577 KS 572
S
Sbjct: 135 PS 136
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = -3
Query: 757 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 578
SS+ + S S+ + + S++S +SSS++ S + +P+SS+ +S P SS S
Sbjct: 93 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 152
Query: 577 KS 572
S
Sbjct: 153 PS 154
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 595 AAGAKRVRC*RRARTLLGCGACCCWSCNNGARQRTHCNGPGSYSNNSVQPC 747
+ G + C + GCG+CC SC N ++ C P ++ +PC
Sbjct: 136 SCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPC 186
>DQ338460-1|ABC69298.1| 494|Homo sapiens putative RhoGAP protein
protein.
Length = 494
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>BC114490-1|AAI14491.1| 494|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 494
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>BC113888-1|AAI13889.1| 465|Homo sapiens ARHGAP19 protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 356 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 402
>AY336750-1|AAR02412.1| 517|Homo sapiens putative RhoGAP protein
protein.
Length = 517
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>AL359385-3|CAI13731.2| 494|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 494
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>AL359385-1|CAI13728.1| 485|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 485
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 376 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 422
>AK093316-1|BAC04130.1| 313|Homo sapiens protein ( Homo sapiens
cDNA FLJ35997 fis, clone TESTI2015042, weakly similar to
RHO-GTPASE-ACTIVATING PROTEIN 1. ).
Length = 313
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 204 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 250
>AK074122-1|BAB84948.1| 196|Homo sapiens FLJ00194 protein protein.
Length = 196
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 545 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 405
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 87 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,592,555
Number of Sequences: 237096
Number of extensions: 2644848
Number of successful extensions: 11331
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11284
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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