Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_C18
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 251 5e-67
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 251 6e-67
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 67 2e-11
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 63 3e-10
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 51 1e-06
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 45 7e-05
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 39 0.006
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 38 0.011
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 38 0.011
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 31 1.6
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 3.7
06_03_0023 + 15558890-15559117,15559229-15560134 29 4.9
01_06_1596 - 38514278-38514346,38514547-38514705,38514776-385148... 29 6.5
01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111 29 6.5
11_02_0146 + 8779249-8780130,8780815-8780970,8781070-8781265,878... 28 8.5
01_03_0185 - 13565903-13565932,13565933-13566013,13566104-135661... 28 8.5
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 251 bits (615), Expect = 5e-67
Identities = 112/190 (58%), Positives = 151/190 (79%)
Frame = +2
Query: 152 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 331
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 114 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 173
Query: 332 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 511
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P+
Sbjct: 174 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPF 232
Query: 512 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 691
+C MD IG +DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +
Sbjct: 233 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCL 292
Query: 692 SGWGAVVYII 721
SGWG V ++
Sbjct: 293 SGWGGFVLLV 302
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 251 bits (614), Expect = 6e-67
Identities = 112/206 (54%), Positives = 157/206 (76%)
Frame = +2
Query: 149 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 328
++ I YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 9 SLQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATD 68
Query: 329 TQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP 508
QT++QRL FR LY+L+E R M+P+ F++++S LLYE+RFGPYF +PVIAGL D +P
Sbjct: 69 AQTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDND-EP 127
Query: 509 YVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDA 688
++C MD IG +DFVVSGT SE LYG CE++++P+++P+ELFETISQAL + DRD
Sbjct: 128 FICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDC 187
Query: 689 ISGWGAVVYIIEKDKITEKHVKTRMD 766
+SGWG V ++ ++ E+ +K RMD
Sbjct: 188 LSGWGGYVLLVTPTEVQERVIKGRMD 213
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 13/212 (6%)
Frame = +2
Query: 170 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 349
NGG VA+ G D +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 350 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 529
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 530 IGCPNEPEDFVVSGTCSEQLYGMCE-ALWEPN------------LKPDELFETISQALVN 670
+G E + GT S + + + L P+ L E + + +
Sbjct: 131 VG-SYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFAS 189
Query: 671 AADRDAISGWGAVVYIIEKDKITEKHVKTRMD 766
A +RD +G + +I K +++ R D
Sbjct: 190 ATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/107 (30%), Positives = 51/107 (47%)
Frame = +2
Query: 170 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 349
NGG VA+ G D +A D R + +S + K+ + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRN 69
Query: 350 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 490
L + LYE N+ M + +LSN LY +RF PY+ V+ GLD
Sbjct: 70 LTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 116
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/191 (20%), Positives = 82/191 (42%)
Frame = +2
Query: 173 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 352
G +V + V +A D R + K+ Q+ +YV G A DTQ + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV 84
Query: 353 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 532
++ ++ + ++ + K + ++ L Y+ + ++ G D Y+ + ++ L
Sbjct: 85 RYFLHQHTIQLGQPATVKVAANLIRLLAYQNK-NMLQAGMIVGGWDKYEG-GQIFSVPLG 142
Query: 533 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 712
G + F + G+ S LYG+ + W+ + +E + + + + A RD SG
Sbjct: 143 GTILR-QPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDGASGGVVRT 201
Query: 713 YIIEKDKITEK 745
I D ++ K
Sbjct: 202 VTINADGVSRK 212
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 45.2 bits (102), Expect = 7e-05
Identities = 43/187 (22%), Positives = 75/187 (40%)
Frame = +2
Query: 173 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 352
G +V + QD V + D R N K+ M P +Y G A DT+ V +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 97
Query: 353 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 532
++ L+ R R T +L + L+ + G V+ G+D P++ +
Sbjct: 98 SSQLQLHRYATGRESRVVTSLTLLKSHLFSYQ-GHVSAALVLGGVDV--TGPHLHTVYPH 154
Query: 533 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 712
G + F G+ S + E+ ++ L +E + +++A+ D SG V
Sbjct: 155 G-STDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAIRGGIFNDLGSGSNVDV 213
Query: 713 YIIEKDK 733
+I K K
Sbjct: 214 CVITKGK 220
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Frame = +2
Query: 173 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 352
G A V ++G D V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 30 GNAAVGVRGSDTVVLGVEKKSTPKLQD-SRSVRKIASLDTHIALACAGLKADARVLINRA 88
Query: 353 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 520
+ + L + + + ++ L Y + G P+ + +I G DPY ++P +
Sbjct: 89 RVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQ 148
Query: 521 MDLIG 535
D G
Sbjct: 149 TDPSG 153
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 37.9 bits (84), Expect = 0.011
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Frame = +2
Query: 173 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 352
G A V ++G D V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 100 GNAAVGVRGTDTVVLGVEKKSTPKLQD-SRSMRKIASLDTHIALACAGLKADARVLINRA 158
Query: 353 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 520
+ + L + + + ++ L Y + G P+ + +I G DPY +P +
Sbjct: 159 RVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQ 218
Query: 521 MDLIG 535
D G
Sbjct: 219 TDPSG 223
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 37.9 bits (84), Expect = 0.011
Identities = 35/120 (29%), Positives = 53/120 (44%)
Frame = +2
Query: 356 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 535
F+ L+EL R + S +L+N+LY R I +IAG D + P + +D G
Sbjct: 67 FQCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWD--EKGPGLYYVDSEG 124
Query: 536 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 715
F V G+ S YG+ + + + +E E +A+ A RD SG VY
Sbjct: 125 ARLMGSRFSV-GSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVY 183
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 644 ETISQALVNAADRDAISGWGAVVYIIEKDKITEK 745
E+I L+ AAD D + +VYI E DKIT+K
Sbjct: 259 ESILYKLLAAADFDVAAAQQGIVYIDEVDKITKK 292
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 175 GCGSRHEGPRLCGHRYGQAVW 237
GCG R + PRL G Q VW
Sbjct: 159 GCGPRRDAPRLVGRAVRQEVW 179
>06_03_0023 + 15558890-15559117,15559229-15560134
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 216 MATQSWPFMATTAPPLYASIDILVI 142
++T +WPF+A A L S+D +++
Sbjct: 4 LSTAAWPFLAAVAAALLCSVDAVIV 28
>01_06_1596 -
38514278-38514346,38514547-38514705,38514776-38514898,
38514985-38515047,38515248-38515352,38515487-38515586,
38515716-38515786,38516329-38516385,38516830-38516907,
38516975-38517049,38517180-38517230,38517453-38517466,
38517516-38517616,38517703-38517764,38518346-38518372,
38518901-38519581
Length = 611
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 644 ETISQALVNAADRDAISGWGAVVYIIEKDKITEK 745
E+I Q L+ AA+ + + +VYI E DKIT+K
Sbjct: 304 ESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKK 337
>01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111
Length = 212
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 668 SPEPVRLSQRVHLASSWAPRELHTYHTAVQ 579
SP PV S R H+ +W P+ T+ + V+
Sbjct: 51 SPSPVATSNREHIIPNWVPQIEMTFSSVVE 80
>11_02_0146 +
8779249-8780130,8780815-8780970,8781070-8781265,
8781574-8781599
Length = 419
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 641 FETISQALVNAADRDAISGWGAVVYIIEKDKITEK 745
F + L+N +D DA G+G +VYI+ + EK
Sbjct: 307 FSKLKTLLLNVSDADA--GFGPLVYILRSSPVLEK 339
>01_03_0185 -
13565903-13565932,13565933-13566013,13566104-13566175,
13566800-13566932,13567068-13567107,13567192-13567258,
13567453-13567719
Length = 229
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 485 LDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEA 607
LD ++ +D+ PN+ E+ + C QLYG+ EA
Sbjct: 123 LDRFEEGAEQFRLDVAANPNDTEESIWCFLCEAQLYGVDEA 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,862,590
Number of Sequences: 37544
Number of extensions: 501321
Number of successful extensions: 1118
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -