Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_C14
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    31   2.2  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    31   2.2  
AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-P...    31   2.9  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G F GG G G     P  PG GGF
Sbjct: 373 GGGGFGGGGGRGGAPGAPGSPGGGGF 398



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G + GG G G     P  PG GGF
Sbjct: 403 GGGGYGGGAGRGGAPGAPGSPGGGGF 428



 Score = 29.9 bits (64), Expect = 5.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G F GG G G     P  PG GG+
Sbjct: 307 GGGGFGGGGGRGGAPGAPGSPGGGGY 332


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G F GG G G     P  PG GGF
Sbjct: 445 GGGGFGGGGGRGGAPGAPGSPGGGGF 470



 Score = 30.3 bits (65), Expect = 3.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G + GG G G     P  PG GGF
Sbjct: 475 GGGGYGGGAGRGGAPGAPGSPGGGGF 500



 Score = 29.9 bits (64), Expect = 5.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 476 GXGXFXGGKGXGAQKXXPXXPGXGGF 399
           G G F GG G G     P  PG GG+
Sbjct: 379 GGGGFGGGGGRGGAPGAPGSPGGGGY 404


>AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-PA
           protein.
          Length = 926

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +2

Query: 377 GXFXPXXKXPPPPGXXXXXFGPXXLSPPXXPXXPGFXXGXXXXXPPXG 520
           G   P    PPPPG       P    PP  P  PG         PP G
Sbjct: 529 GQGPPPGAYPPPPGSQQVPPVPGQQQPPPGPPPPGQPPTGGQQQPPPG 576


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,754,393
Number of Sequences: 53049
Number of extensions: 320261
Number of successful extensions: 955
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)