Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_C12
(810 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X01760-1|CAA25900.1| 108|Drosophila melanogaster protein ( Dros... 44 2e-04
M11381-1|AAA28437.1| 108|Drosophila melanogaster protein ( D.me... 44 2e-04
AY071701-1|AAL49323.1| 108|Drosophila melanogaster RH17228p pro... 44 2e-04
AE014134-2753|AAF53554.1| 108|Drosophila melanogaster CG17903-P... 44 2e-04
X01761-1|CAA25901.1| 105|Drosophila melanogaster protein ( Dros... 42 0.001
BT006002-1|AAO67367.1| 105|Drosophila melanogaster LP05614p pro... 42 0.001
AE014134-2752|AAF53553.1| 105|Drosophila melanogaster CG13263-P... 42 0.001
>X01760-1|CAA25900.1| 108|Drosophila melanogaster protein (
Drosophila melanogastercytochrome c gene DC4. ).
Length = 108
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGIPFGPKNWPGCRILIXRFQXAKG 355
AG+ E GKK+FVQR C H ++ GG H K PNLHG+ G K AKG
Sbjct: 5 AGDVEKGKKLFVQR-CAQCHTVEAGGKH-KVGPNLHGL-IGRKTGQAAGFAYTDANKAKG 61
Query: 356 XHGND 370
N+
Sbjct: 62 ITWNE 66
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K CAQCHT A K + L+ RKTGQAAGF+Y D+ K +
Sbjct: 12 KKLFVQRCAQCHTV---EAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDT 68
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ NPKK K + G +K R
Sbjct: 69 LFEYLENPKKYIPGTKMIFAGLKKPNER 96
>M11381-1|AAA28437.1| 108|Drosophila melanogaster protein (
D.melanogaster cytochromeC gene. ).
Length = 108
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGIPFGPKNWPGCRILIXRFQXAKG 355
AG+ E GKK+FVQR C H ++ GG H K PNLHG+ G K AKG
Sbjct: 5 AGDVEKGKKLFVQR-CAQCHTVEAGGKH-KVGPNLHGL-IGRKTGQAAGFAYTDANKAKG 61
Query: 356 XHGND 370
N+
Sbjct: 62 ITWNE 66
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K CAQCHT A K + L+ RKTGQAAGF+Y D+ K +
Sbjct: 12 KKLFVQRCAQCHTV---EAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDT 68
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ NPKK K + G +K R
Sbjct: 69 LFEYLENPKKYIPGTKMIFAGLKKPNER 96
>AY071701-1|AAL49323.1| 108|Drosophila melanogaster RH17228p
protein.
Length = 108
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGIPFGPKNWPGCRILIXRFQXAKG 355
AG+ E GKK+FVQR C H ++ GG H K PNLHG+ G K AKG
Sbjct: 5 AGDVEKGKKLFVQR-CAQCHTVEAGGKH-KVGPNLHGL-IGRKTGQAAGFAYTDANKAKG 61
Query: 356 XHGND 370
N+
Sbjct: 62 ITWNE 66
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K CAQCHT A K + L+ RKTGQAAGF+Y D+ K +
Sbjct: 12 KKLFVQRCAQCHTV---EAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDT 68
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ NPKK K + G +K R
Sbjct: 69 LFEYLENPKKYIPGTKMIFAGLKKPNER 96
>AE014134-2753|AAF53554.1| 108|Drosophila melanogaster CG17903-PA
protein.
Length = 108
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGIPFGPKNWPGCRILIXRFQXAKG 355
AG+ E GKK+FVQR C H ++ GG H K PNLHG+ G K AKG
Sbjct: 5 AGDVEKGKKLFVQR-CAQCHTVEAGGKH-KVGPNLHGL-IGRKTGQAAGFAYTDANKAKG 61
Query: 356 XHGND 370
N+
Sbjct: 62 ITWNE 66
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K CAQCHT A K + L+ RKTGQAAGF+Y D+ K +
Sbjct: 12 KKLFVQRCAQCHTV---EAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDT 68
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ NPKK K + G +K R
Sbjct: 69 LFEYLENPKKYIPGTKMIFAGLKKPNER 96
>X01761-1|CAA25901.1| 105|Drosophila melanogaster protein (
Drosophila melanogastercytochrome c gene DC3. ).
Length = 105
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGI 289
+G+AENGKKIFVQ+ C H ++GG H K PNL G+
Sbjct: 3 SGDAENGKKIFVQK-CAQCHTYEVGGKH-KVGPNLGGV 38
Score = 35.1 bits (77), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K +CAQCHT + K +G ++ RK G AAG+ Y D+ +
Sbjct: 10 KKIFVQKCAQCHT---YEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTWTEGN 66
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ +PKK K V G +K + R
Sbjct: 67 LDEYLKDPKKYIPGTKMVFAGLKKAEER 94
>BT006002-1|AAO67367.1| 105|Drosophila melanogaster LP05614p
protein.
Length = 105
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGI 289
+G+AENGKKIFVQ+ C H ++GG H K PNL G+
Sbjct: 3 SGDAENGKKIFVQK-CAQCHTYEVGGKH-KVGPNLGGV 38
Score = 35.1 bits (77), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K +CAQCHT + K +G ++ RK G AAG+ Y D+ +
Sbjct: 10 KKIFVQKCAQCHT---YEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTWTEGN 66
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ +PKK K V G +K + R
Sbjct: 67 LDEYLKDPKKYIPGTKMVFAGLKKAEER 94
>AE014134-2752|AAF53553.1| 105|Drosophila melanogaster CG13263-PA
protein.
Length = 105
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 176 AGNAENGKKIFVQRMCPVPHWLKLGGXHXKXDPNLHGI 289
+G+AENGKKIFVQ+ C H ++GG H K PNL G+
Sbjct: 3 SGDAENGKKIFVQK-CAQCHTYEVGGKH-KVGPNLGGV 38
Score = 35.1 bits (77), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
+K +CAQCHT + K +G ++ RK G AAG+ Y D+ +
Sbjct: 10 KKIFVQKCAQCHT---YEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTWTEGN 66
Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
+ +PKK K V G +K + R
Sbjct: 67 LDEYLKDPKKYIPGTKMVFAGLKKAEER 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,385,127
Number of Sequences: 53049
Number of extensions: 594315
Number of successful extensions: 3807
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3029
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -