Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_C12
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical pr...    32   0.42 
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   3.2  
Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribo...    28   6.9  
Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    28   9.1  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    28   9.1  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    28   9.1  

>Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical
           protein ZC116.2 protein.
          Length = 123

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +3

Query: 198 RKFLYNECAQCHTG*SWVANTKSXTRIYMGFLLXRKTGQAAGFSYXDSXKLRAFMGMTPP 377
           +K     C QCH     V + ++ T   +  ++ R++GQ AGF Y  + K +  +     
Sbjct: 23  KKIFKQRCEQCHV----VNSLQTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGVVWDRQT 78

Query: 378 X*NF-GNPKKXSLEPKRVLXGPQKGKXR 458
             ++  +PKK     K V  G +K   R
Sbjct: 79  LFDYLADPKKYIPGTKMVFAGLKKADER 106


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 26.6 bits (56), Expect(2) = 3.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 744  PPPXXKKXXXGXXKKXPPPPP 806
            PPP   K   G     PPPPP
Sbjct: 1361 PPPTMSKAPTGVPLPVPPPPP 1381



 Score = 21.0 bits (42), Expect(2) = 3.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 792  PPPPPP 809
            PPPPPP
Sbjct: 1390 PPPPPP 1395


>Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical
           protein E02H1.4 protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 38  LKILMSCDSNATIHVVSIKCLKFGD-FGRP 124
           LK LM C  +  +H+  +K LKF + FGRP
Sbjct: 155 LKELMKCICDEDVHLGLLKQLKFNEAFGRP 184


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 745 PPPXXKXXXGGXXKKXPPPPPR 810
           PPP  +    G     PPPPPR
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPR 145



 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 744 PPPXXKKXXXGXXKKXPPPPP 806
           PPP  +K   G     PPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPP 144


>AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-2 protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 38  LKILMSCDSNATIHVVSIKCLKFGD-FGRP 124
           LK LM C  +  +H+  +K LKF + FGRP
Sbjct: 155 LKELMKCICDEDVHLGLLKQLKFNEAFGRP 184


>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 744 PPPXXKKXXXGXXKKXPPPPPP 809
           PPP       G  +  PPPPPP
Sbjct: 39  PPPPPPPPCGGGYEAPPPPPPP 60


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 744 PPPXXKKXXXGXXKKXPPPPPP 809
           PPP  +    G     PPPPPP
Sbjct: 558 PPPPTRVESHGLAPARPPPPPP 579


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 744 PPPXXKKXXXGXXKKXPPPPPP 809
           PPP  +    G     PPPPPP
Sbjct: 384 PPPPTRVESHGLAPARPPPPPP 405


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,662,789
Number of Sequences: 27780
Number of extensions: 285973
Number of successful extensions: 1505
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)