Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_C12
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   7.7  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/36 (22%), Positives = 15/36 (41%)
 Frame = +2

Query: 41  KILMSCDSNATIHVVSIKCLKFGDFGRPKKFGCYIN 148
           K    C       +  ++  ++G+F   +K  CY N
Sbjct: 38  KYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFN 73


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 271 PESTWDSFWXEKLARLQDSHTPIP 342
           P +T+ +FW E L +L+    P P
Sbjct: 569 PRTTYCAFWNEFLPKLKGIPDPXP 592


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 378 GGVSFP*XPLAXWNRXMRILQPG 310
           G +S P  PLA WN     L+PG
Sbjct: 165 GAISSP--PLAGWNDWPEELEPG 185


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 378 GGVSFP*XPLAXWNRXMRILQPG 310
           G +S P  PLA WN     L+PG
Sbjct: 165 GAISSP--PLAGWNDWPEELEPG 185


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 378 GGVSFP*XPLAXWNRXMRILQPG 310
           G +S P  PLA WN     L+PG
Sbjct: 165 GAISSP--PLAGWNDWPEELEPG 185


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 110 DFGRPKKFGCYINYKNLKWV 169
           DFGRP  F C +    +K V
Sbjct: 320 DFGRPATFTCNVRGNPIKTV 339


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 783 KKXPPPPPP 809
           K  PPPPPP
Sbjct: 340 KPAPPPPPP 348


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 214 TNVPSATLVEAGWXTXKVXPES 279
           T +PSA +V   W    + PE+
Sbjct: 220 TYIPSALIVVMSWIAFWIKPEA 241


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,863
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)