Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_C07
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 172 1e-42
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 172 2e-42
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 172 2e-42
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 172 2e-42
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 172 2e-42
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 172 2e-42
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 172 2e-42
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 172 2e-42
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 170 7e-42
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 172 bits (419), Expect = 1e-42
Identities = 81/154 (52%), Positives = 108/154 (70%), Gaps = 2/154 (1%)
Frame = +2
Query: 317 LDDDESVVKSS--QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVES 490
L +DE V+ S +D D + P+ DL D A V+F VGF NKG+ D++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 491 MEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRD 670
++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKD 152
Query: 671 ASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
+GN +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 153 LNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMF 186
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 172 bits (418), Expect = 2e-42
Identities = 81/151 (53%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 170 bits (413), Expect = 7e-42
Identities = 80/151 (52%), Positives = 107/151 (70%)
Frame = +2
Query: 320 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 499
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 500 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 679
SFRYP D+ +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDHQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 680 NAYQEAVYNQTLNIVEVSEGLDGETFFLYVF 772
N +Q+AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 183 NVFQDAVFNQTVTVIEREDGLDGETIFMYMF 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,115,669
Number of Sequences: 237096
Number of extensions: 2664109
Number of successful extensions: 4781
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4781
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -