Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_C03
         (913 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   2.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   2.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = -1

Query: 631 GC-GIEIQTLESGIGYACGTSNDCVADDVNSHERSVLCR 518
           GC G   +T+   + YAC     C+ D      R   CR
Sbjct: 129 GCKGFFKRTVRKDLSYACREEKSCIIDK-RQRNRCQYCR 166


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = -1

Query: 631 GC-GIEIQTLESGIGYACGTSNDCVADDVNSHERSVLCR 518
           GC G   +T+   + YAC     C+ D      R   CR
Sbjct: 129 GCKGFFKRTVRKDLSYACREEKSCIIDK-RQRNRCQYCR 166


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 355 VDLRIQQMRSLEDF 314
           +DLR +Q++SLED+
Sbjct: 371 IDLRKKQLKSLEDW 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,676
Number of Sequences: 438
Number of extensions: 4010
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)