Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_B19
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1125 - 9268507-9268557,9268771-9268828,9268920-9269007,926...   188   4e-48
05_03_0370 + 13144612-13144639,13144749-13145260,13146995-131473...   180   1e-45
02_05_1306 - 35595177-35595218,35595591-35595636,35595687-355957...    90   2e-18
03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865           65   6e-11
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222...    29   5.0  
02_02_0275 + 8478374-8478706                                           29   6.6  
02_05_0243 - 27124559-27124864,27126922-27126990,27127741-271279...    28   8.7  
01_07_0138 - 41383304-41384458                                         28   8.7  
01_05_0148 + 18609853-18610058,18610347-18612669                       28   8.7  

>06_01_1125 -
           9268507-9268557,9268771-9268828,9268920-9269007,
           9269162-9269207,9269304-9269339,9269438-9269509,
           9269946-9270058,9271626-9271740,9273728-9273772
          Length = 207

 Score =  188 bits (459), Expect = 4e-48
 Identities = 90/147 (61%), Positives = 112/147 (76%), Gaps = 1/147 (0%)
 Frame = +3

Query: 246 MIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIP 425
           +IWKGL+VVTGSESP+VVVLSGSMEP F RGD+LFL +  ++P+R GEIVVF V+GR+IP
Sbjct: 62  IIWKGLIVVTGSESPVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNVDGREIP 120

Query: 426 IVHRVLKLHEKNNGT-VKFLTKGDNNSVDDRGLYAQGQLWLTKKDVVGRARGFLPYVGMV 602
           IVHRV+K+HE+     V  LTKGDNN  DDR LYA GQLWL +  ++GRA GFLPYVG V
Sbjct: 121 IVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWV 180

Query: 603 TIYMNEYPKFKFAVLACLAIYVLVHRE 683
           TI M E P  K+ ++  L + V+  +E
Sbjct: 181 TIIMTEKPIIKYLLIGALGLLVITSKE 207


>05_03_0370 +
           13144612-13144639,13144749-13145260,13146995-13147327,
           13147690-13147699,13149704-13149816,13151187-13151258,
           13151397-13151432,13151552-13151597,13151726-13151828,
           13151916-13151973,13152231-13152281
          Length = 453

 Score =  180 bits (438), Expect = 1e-45
 Identities = 89/152 (58%), Positives = 111/152 (73%), Gaps = 6/152 (3%)
 Frame = +3

Query: 246 MIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIP 425
           +IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL +  ++P+R GEIVVF ++GR+IP
Sbjct: 303 IIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSKDPIRTGEIVVFNIDGREIP 361

Query: 426 IVHRVLKLHEKNNGT-VKFLTK-----GDNNSVDDRGLYAQGQLWLTKKDVVGRARGFLP 587
           IVHRV+K+HE+     V  LTK     GDNN  DDR LYA GQLWL +  ++GRA GFLP
Sbjct: 362 IVHRVIKVHEREESAEVDILTKVNCFSGDNNFGDDRLLYAHGQLWLHQHHIMGRAVGFLP 421

Query: 588 YVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 683
           YVG VTI M E P  K+ ++  L + V+  +E
Sbjct: 422 YVGWVTIIMTEKPFIKYLLIGALGLLVITSKE 453


>02_05_1306 -
           35595177-35595218,35595591-35595636,35595687-35595778,
           35595945-35596013,35596153-35596265,35596503-35596542
          Length = 133

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 43/68 (63%), Positives = 56/68 (82%)
 Frame = +3

Query: 246 MIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIP 425
           MIWKGL+++TGSESP+VVVLS SME  F RGD+LFL    + P+R G+IVVF  +GR+IP
Sbjct: 22  MIWKGLIIMTGSESPLVVVLSESMELGFERGDILFL-QMSKHPIRTGDIVVFN-DGREIP 79

Query: 426 IVHRVLKL 449
           IVHRV+++
Sbjct: 80  IVHRVIEV 87


>03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865
          Length = 648

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
 Frame = +3

Query: 261 LMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNYP-----EEPVRVGEIVVFKVEGRDIP 425
           L++   + +   VV+SGSMEP   RGD+L +         ++ +R G+IV+F  E   +P
Sbjct: 43  LLLGKATGTTATVVVSGSMEPGIRRGDMLIVRERRNDGDGDDNIRAGDIVLFSTELHPVP 102

Query: 426 IVHRVLKLHEKNNGTVK-FLTKGDN 497
           IVHRV++LHE+++G  +  LTKG N
Sbjct: 103 IVHRVIELHERHDGGARQMLTKGAN 127


>12_02_0932 +
           24519204-24519380,24520074-24520128,24520251-24522202,
           24522288-24522446,24522878-24523049,24523131-24523429,
           24524037-24524285
          Length = 1020

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +2

Query: 146 TMLESLFDDV--RRMNKRQFMYQVLSFGMIVSSALNDMERFDGSNRK*KPNSSSTVRQYG 319
           T+LES+F++     +  +   YQ+L  G    +AL +     G N K K + +  V+   
Sbjct: 500 TLLESIFNNTGGEVVIDQDGKYQIL--GTPTETALLEFALSLGGNFKAKRDETKIVKMEP 557

Query: 320 ASFSQRRLAVFNQLP*GAC 376
            + +++R+ V  +LP G C
Sbjct: 558 FNSTKKRMCVVLKLPGGGC 576


>02_02_0275 + 8478374-8478706
          Length = 110

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 261 LMVVTGSESPIVVVLSGSMEPAFH 332
           L++VTGS SP+ V +SG   P  H
Sbjct: 15  LLLVTGSSSPVSVSVSGDRCPVLH 38


>02_05_0243 -
           27124559-27124864,27126922-27126990,27127741-27127926,
           27128572-27129093
          Length = 360

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 369 EPVRVGEIVVFKVEGRDIPIVHRVLKLHEK-NNG 467
           +P R G +V   V G+ +P+     +LH K NNG
Sbjct: 265 QPRRSGRVVTVSVVGKQVPLYGAGAELHSKPNNG 298


>01_07_0138 - 41383304-41384458
          Length = 384

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +2

Query: 647 GLSCNLCISTQGVTEALRSEVLGREQEY---TYFC 742
           G SC+LC+ST+G  + LR+ +      Y    Y+C
Sbjct: 311 GSSCSLCVSTRGFHDDLRNRLFFAWPSYESGKYYC 345


>01_05_0148 + 18609853-18610058,18610347-18612669
          Length = 842

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 764 FTEPYNFXKSMYIPALFPTLQILALLSLP 678
           FT  YN  K +++   FP L++L L  LP
Sbjct: 733 FTRAYNGEKLVFLTRWFPKLKVLRLRDLP 761


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,115,683
Number of Sequences: 37544
Number of extensions: 425828
Number of successful extensions: 931
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)