Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B18
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 40 0.004
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 39 0.005
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 39 0.005
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 38 0.008
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 37 0.019
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.23
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 33 0.40
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 32 0.53
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 31 1.2
03_01_0249 - 1935355-1935827,1936129-1936330 31 1.2
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 30 2.1
02_05_1323 + 35700147-35701649 30 2.1
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588... 29 6.6
09_04_0448 + 17692650-17692970,17693461-17693811 28 8.7
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 39.5 bits (88), Expect = 0.004
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 21/174 (12%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG-AN----------------- 345
PD + PFGQ+P +S AICRY+ RK+ AN
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKHRATDEANLLREGDPSESAVVDAWL 103
Query: 346 DEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANK 525
D EA + +V + R A+ E DE + A+ S + L + +EA +
Sbjct: 104 DVEALRYEPSVHAVFVQRRVVPALGGEPDERVIAE-----SVARLRETLAVYEARLEATR 158
Query: 526 GHIAAGKLTWGDFVFTSMFDYLKXMLQIPDLEVQYXAFKKVL---QSVLTQPKV 678
G++A G+++ D S F Y + +++P + A+ +V + +LT+P V
Sbjct: 159 GYLAGGEVSLADL---SHFPYTRYFMEMPYEVPVFGAYPRVTAWWERLLTRPSV 209
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 39.1 bits (87), Expect = 0.005
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +1
Query: 193 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRKYG------LAGANDE 351
D V+ P+ + PFGQ+P DG Y +S AI +Y+ RKY L N
Sbjct: 35 DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 352 EAFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKG 528
EA +D E H + + + YE A + ++ V + +KL ++E +
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLEVYEA 152
Query: 529 HIAAGKLTWGDFV 567
++ GDFV
Sbjct: 153 RLSQSTYLAGDFV 165
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 39.1 bits (87), Expect = 0.005
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY-----GLA-GANDEEAFEIDQNVE 381
P+ + PFG++PVL QS AI RY+ RKY GL G + EE+ +D ++
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLD 103
Query: 382 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 558
H A + + + + D + V + ++KL ++ + ++ + G
Sbjct: 104 VEAHQHEAAVRPILWHC--IINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRYLAG 161
Query: 559 DFVFTSMFDYLKXMLQIPDLEV-----QYXAFKKVLQSVLTQPKVXAFLNLGRPYEFEF 720
D + + + M E Y K +++L +P V + G P +F F
Sbjct: 162 DRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEALLARPTVQKVM-AGMPPDFGF 219
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 38.3 bits (85), Expect = 0.008
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Frame = +1
Query: 193 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGA------NDEE 354
D + + P+ + PFGQMP +S A+ RY+ RKY + A N E
Sbjct: 35 DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94
Query: 355 AFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGH 531
A +D +E +H +++ YE A ++ V + L+KL ++E +
Sbjct: 95 AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
Query: 532 IAAGKLTWGDFV 567
++ G+F+
Sbjct: 154 LSQNTYLAGNFL 165
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 178 GQDFE----DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 345
G DF+ D R + P F PFGQ+PVL + +S AI RY+ KY GA+
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRK 324
PD + PFGQ+P L DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 32.7 bits (71), Expect = 0.40
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEID--QNVEF 384
P + PFGQ+P +S AI +Y+ RK+G L +N E+ +D VE
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVES 103
Query: 385 LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 564
H A + ++ + D V + L+KL +E + ++ K GDF
Sbjct: 104 SHFDGAMSPIIFQCFIVPMFMGGATDI--GVVNESLEKLKKALEVYEAQLSKSKYLAGDF 161
Query: 565 V 567
+
Sbjct: 162 I 162
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 32.3 bits (70), Expect = 0.53
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG------LAGANDEEAFEIDQNVE 381
P+ + PFG++P L +S AI +Y+ RKY L ++ EA +D E
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALVDVWTE 103
Query: 382 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 558
H + + +E + ++ V + L+KL ++E + ++ + G
Sbjct: 104 VEAHQYYPALSPIVFEC-IIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSRYLAG 162
Query: 559 DFV 567
DF+
Sbjct: 163 DFL 165
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.1 bits (67), Expect = 1.2
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNVEF-L 387
P+F P G++PVL +S AI RY+ R L G++ + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126
Query: 388 HDIRAKAAA-VYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 564
++ A +Y E+F+ L LN+ + +N ++ +T D
Sbjct: 127 TEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNT-YLVGHSVTLADI 185
Query: 565 VFTSMFDYLKXMLQIPDLEVQYXAFKKVLQSVLTQP 672
V T Y + I ++ ++ +++ QP
Sbjct: 186 VMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQP 221
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 220 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG 339
P F PFGQ+P +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 157 RMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 327
R++L G D+E V PD++ P +P LV + S AI YL KY
Sbjct: 21 RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>02_05_1323 + 35700147-35701649
Length = 500
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 23 IGNPLRXGVFASAIEPSARRLTTIN*KCLRLCTITSLARLSGRAA 157
+ N L + A+ SARR+ +N C +C+ TSL GRAA
Sbjct: 124 VSNGLIHAYASCALLCSARRVFDVNVSCRDVCSWTSLLTAYGRAA 168
>06_01_0786 -
5881178-5881303,5881523-5881627,5882078-5882169,
5882267-5882336,5882639-5882724,5882916-5883017,
5883375-5883597,5883693-5883758,5883896-5883986,
5884019-5884057,5885401-5885548,5885623-5885715,
5885782-5885886,5886645-5886826,5886912-5887084
Length = 566
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 243 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 133
R LW+E RP G AV+ + A G PE A
Sbjct: 46 RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 250 QMPVLVIDGKQYAQSTAICRYL 315
++PVLV DGK A+ST I Y+
Sbjct: 55 KVPVLVHDGKPLAESTVIVEYI 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,742,529
Number of Sequences: 37544
Number of extensions: 337355
Number of successful extensions: 1014
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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