Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_B16
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       30   2.8  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   4.9  
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076...    28   8.6  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   8.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   8.6  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGP 805
           P+    P FPPL    P PPP  P P
Sbjct: 302 PQLPPLPHFPPLPSFYPSPPPPPPPP 327


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 193 INTLAESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 342
           ++   E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 254 VHATLEEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


>03_06_0448 -
           34005581-34005655,34005735-34005830,34006669-34007616,
           34007684-34007851,34007908-34008099,34008164-34008346,
           34008414-34008590,34008667-34012074
          Length = 1748

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 861 VFPPLGGXXPXPPPXXPGP 805
           + PPL G  P PPP  P P
Sbjct: 32  LLPPLAGAPPPPPPFRPPP 50


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 175 PKEDNSINTLAESAKKTIEELREKVE 252
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 870 GKPVFPPLGGXXPXPPPXXPGP 805
           G P  PP  G  P PPP  P P
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSP 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,363,190
Number of Sequences: 37544
Number of extensions: 391167
Number of successful extensions: 1176
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)