Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_B16
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    31   4.2  
X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing f...    31   7.3  
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    31   7.3  
BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.         31   7.3  
BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.         31   7.3  
AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor proline...    31   7.3  
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        30   9.7  
BC062344-1|AAH62344.1|  256|Homo sapiens PTCHD1 protein protein.       30   9.7  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     30   9.7  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    30   9.7  

>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGP 805
           P     P+  P GG  P PPP  PGP
Sbjct: 48  PTLPPPPLSQPTGGAPPPPPPPPPGP 73


>X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing
           factor protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGPXGXWXXERXGP 772
           P   G P  PP  G  P PP   PGP G    +  GP
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGP-GPGPKQGPGP 204


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGPXGXWXXERXGP 772
           P   G P  PP  G  P PP   PGP G    +  GP
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGP-GPGPKQGPGP 204


>BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGPXGXWXXERXGP 772
           P   G P  PP  G  P PP   PGP G    +  GP
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGP-GPGPKQGPGP 204


>BC004534-1|AAH04534.2|  634|Homo sapiens SFPQ protein protein.
          Length = 634

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGPXGXWXXERXGP 772
           P   G P  PP  G  P PP   PGP G    +  GP
Sbjct: 96  PPSSGVPTTPPQAGGPPPPPAAVPGP-GPGPKQGPGP 131


>AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -1

Query: 882 PRFXGKPVFPPLGGXXPXPPPXXPGPXGXWXXERXGP 772
           P   G P  PP  G  P PP   PGP G    +  GP
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGP-GPGPKQGPGP 204


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 864 PVFPPLGGXXPXPPPXXPGPXG 799
           P  PPL G  P PPP  P P G
Sbjct: 157 PPAPPLPGDLPPPPPPPPPPPG 178


>BC062344-1|AAH62344.1|  256|Homo sapiens PTCHD1 protein protein.
          Length = 256

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 405 HSIYLGLCT*ILKNYFSGFRCFRGLQIFIKFVE 307
           +S +LG+   +L NY+S F CFR L +  +F++
Sbjct: 221 NSTFLGVPFVMLGNYYSSFFCFRLLVVLTRFLK 253


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 864 PVFPPLGGXXPXPPPXXPGPXG 799
           P  PPL G  P PPP  P P G
Sbjct: 575 PPAPPLPGDLPPPPPPPPPPPG 596


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 864 PVFPPLGGXXPXPPPXXPGPXG 799
           P  PPL G  P PPP  P P G
Sbjct: 466 PPAPPLPGDLPPPPPPPPPPPG 487


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,901,811
Number of Sequences: 237096
Number of extensions: 2380349
Number of successful extensions: 8717
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8453
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)