Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B14
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 32 2.5
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 32 2.5
BX641037-1|CAE46023.1| 441|Homo sapiens hypothetical protein pr... 31 4.3
BC107570-1|AAI07571.1| 520|Homo sapiens BAZ2B protein protein. 31 4.3
BC012576-1|AAH12576.1| 643|Homo sapiens BAZ2B protein protein. 31 4.3
AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein. 31 4.3
AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to... 31 4.3
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 31 5.7
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 31 5.7
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 31 5.7
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 31 5.7
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein. 31 5.7
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 31 5.7
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 32.3 bits (70), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 259 EEDKENQGDETQGQQPPQARYRRNFNYRRRRPENP 293
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 257 EEDKENQGDETQGQQPPQARYRRNFNYRRRRPENP 291
>BX641037-1|CAE46023.1| 441|Homo sapiens hypothetical protein
protein.
Length = 441
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 346 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 519
DAR + + K+ ++ +E + +DSG SD +G I + D+ ED ++D++
Sbjct: 221 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 276
>BC107570-1|AAI07571.1| 520|Homo sapiens BAZ2B protein protein.
Length = 520
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 346 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 519
DAR + + K+ ++ +E + +DSG SD +G I + D+ ED ++D++
Sbjct: 160 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 215
>BC012576-1|AAH12576.1| 643|Homo sapiens BAZ2B protein protein.
Length = 643
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 346 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 519
DAR + + K+ ++ +E + +DSG SD +G I + D+ ED ++D++
Sbjct: 27 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 82
>AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein.
Length = 2142
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 346 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 519
DAR + + K+ ++ +E + +DSG SD +G I + D+ ED ++D++
Sbjct: 231 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 286
>AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to
zinc finger domain 2B protein.
Length = 1972
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 346 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 519
DAR + + K+ ++ +E + +DSG SD +G I + D+ ED ++D++
Sbjct: 27 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 82
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 301 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 335
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 257 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 291
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein.
Length = 181
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 118 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 152
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EEDKEYNGSRSSPEEPRNVRHQEILQYRERLPISP 329
EEDKE G + ++P R++ YR R P +P
Sbjct: 261 EEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENP 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,712,849
Number of Sequences: 237096
Number of extensions: 2587653
Number of successful extensions: 6145
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6140
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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