Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B10
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 32 0.71
08_02_0885 + 22268287-22268988 31 1.6
06_02_0238 - 13357877-13357954,13358186-13358302,13358537-133586... 31 1.6
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 30 2.2
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 30 2.9
03_05_0209 + 22014556-22015308 30 2.9
02_05_0503 - 29574135-29574536,29575075-29575959,29576129-29576209 30 2.9
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 30 2.9
01_06_1439 + 37374739-37375473 29 3.8
11_06_0610 - 25449085-25453284 29 5.0
11_02_0037 - 7613632-7613727,7614452-7615507 29 5.0
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 5.0
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 5.0
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 29 5.0
04_03_0235 - 13111282-13111878 29 6.6
03_01_0245 + 1916718-1917443,1917534-1917719 29 6.6
05_03_0441 - 14037497-14038006,14038208-14038369 28 8.7
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315... 28 8.7
02_05_0040 + 25341418-25341810 28 8.7
02_04_0224 - 21059328-21059888,21060388-21060462,21060715-210607... 28 8.7
01_06_1431 + 37317248-37317907 28 8.7
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 8.7
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 31.9 bits (69), Expect = 0.71
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +1
Query: 100 STWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 279
ST ++V S + TT + + L +ALR ++ T P P+TPI+S T+
Sbjct: 22 STEPFYSVASCSRTTRIACHASLLPHGAALRALATAMATPTPM-------PHTPISSQTL 74
Query: 280 HPSPPPANRSSGGISPLRTLSL 345
+P + R GG RTL+L
Sbjct: 75 TLAPHVSRRRCGGSVRARTLAL 96
>08_02_0885 + 22268287-22268988
Length = 233
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 148 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKRPNTPITSCTMHPSPPP 297
LTMT +M KA+ + T PA RC+RP+ +C M PP
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPP 82
>06_02_0238 -
13357877-13357954,13358186-13358302,13358537-13358641,
13359301-13359393,13359801-13359888,13359979-13360028,
13361147-13361205,13361297-13361516,13361611-13361691,
13364034-13364111,13364203-13364298,13364370-13364435
Length = 376
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 226 AAVHRCKRPNTPITSCTMHPSPPPANRSSGGIS----PLRTLSLFMDMSPFRQACIHAVT 393
AA HR C++ S P SSGG P R + +D++ RQ +H V+
Sbjct: 123 AATHRRNGAAVTALLCSVPISGPSDAASSGGKDKAKKPTRLNIVGLDIT--RQFLLHIVS 180
Query: 394 GTDAAKDL 417
GTD KD+
Sbjct: 181 GTDVEKDV 188
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 142 TSLTMTS-GYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T L MTS G ++ TVWPAA+ RP P T + PP A+ S G
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFAL---PPGASLSVAG 136
Query: 319 IS 324
++
Sbjct: 137 VT 138
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 191 GKRVR*R--VPSGPQLSTGASARTLPSPAARCIPPPRLRT 304
G+R R R + PQ + G+ A L + R PPPRLRT
Sbjct: 156 GRRSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRT 195
>03_05_0209 + 22014556-22015308
Length = 250
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 79 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNT 258
A + L + + V + VFS T+ L ++M + AL S+ A +RC +
Sbjct: 36 ALISLVSPSSVEYTVFSSTLPAPLRALGSFVMSKKALFVLSNAIFLFLAADYYRCFFSLS 95
Query: 259 PITS 270
P TS
Sbjct: 96 PSTS 99
>02_05_0503 - 29574135-29574536,29575075-29575959,29576129-29576209
Length = 455
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 279 ASLPPACEQVFGGNIAAQDPVIVHGHVAFQTSV 377
+SLP +FGG IA QDP + GHV SV
Sbjct: 256 SSLPKLTRMIFGGWIAFQDP-LSFGHVPLLESV 287
>01_06_1713 - 39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 310 SGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAA 453
SGG L LSL + + F+ A ++ + DAA DL ++GR + A
Sbjct: 1080 SGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKA 1127
>01_06_1439 + 37374739-37375473
Length = 244
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Frame = +1
Query: 217 VWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGGI------SPLRTLSLFMDMSPFRQAC 378
VWP+ CK P T P PPP +R+ I S T S D S
Sbjct: 34 VWPS----CKNPRTQSFRAATAPPPPPGSRTIASIFLDSAESSFTTSSARHDCSDSLSTA 89
Query: 379 IHAVTGTDAAKDLHEA 426
A G +AA +A
Sbjct: 90 SEASAGAEAADTADDA 105
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 215 PSGPQLSTGASARTLPSPAARCIPPPRLR 301
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 147 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 290
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 245 LHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEKTAKFTQVEAVSFNVAHLKF 66
L+ T+ ++RVT RS D+ + P V L V++S+ +FTQ+ ++ + L+F
Sbjct: 749 LYQITSRFDSLRVTP---RSLDILAKGPPVCGDLAVSLSQAGPQFTQIMRCNYAIKALRF 805
Query: 65 RCA 57
A
Sbjct: 806 STA 808
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 241 CKRPNTPITSCTMHPSPPPA 300
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +1
Query: 109 VNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHR--------CKRPNTPI 264
VNF + S + SL + G L + L+ + ++ P+A + P++P
Sbjct: 178 VNFDISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPTGSTPTQTPSSPS 237
Query: 265 TSCTMHPSPPPANRSSG 315
+S T PS P+N S G
Sbjct: 238 SSGTPSPSSSPSNSSGG 254
>04_03_0235 - 13111282-13111878
Length = 198
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 223 PAAVHRCKRPNTPITSCTMHPSPPPANRSSGGISPL 330
PA H TP + HP PPP+ ++G SP+
Sbjct: 104 PAVDHIWSPLQTPTSRSCHHPPPPPSFPAAGCCSPI 139
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 233 STGASARTLPSPAARCIPPPRLRTGLRGEYRRSGPCHC 346
ST SART +P C P R G+R R G C
Sbjct: 86 STTTSARTPRTPKTPCTPTARRLCGVRSRTPRRGQVGC 123
>05_03_0441 - 14037497-14038006,14038208-14038369
Length = 223
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 230 LSTGASAR--TLPSPA-ARCIPPPRLRTGLRGEYRRSGPCHCS 349
LS GASA+ TLPSPA ARC P R RG S C C+
Sbjct: 102 LSLGASAQATTLPSPALARCGTPRPRRPPPRG----SRSCRCA 140
>04_04_1397 -
33230416-33230742,33230852-33231007,33231130-33231543,
33234177-33234307,33235076-33235202,33235709-33236209,
33237624-33237935,33238690-33238719
Length = 665
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 679 CVYSLDCQSN-VTRAVPRYPCKSLHWIQLSQLIG 581
CV+ CQ + R++PR P L W+Q++ G
Sbjct: 562 CVHQRYCQDDGELRSLPRCPHSHLSWVQITGFFG 595
>02_05_0040 + 25341418-25341810
Length = 130
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +2
Query: 218 SGPQLSTGASARTLPSPAARCIPPPRLRTGLRGEYRRSGP 337
SGPQ GA R P RC PR R G RR GP
Sbjct: 90 SGPQRRRGAPRRRCSGPQLRC-GAPRWRHG-SSRQRRIGP 127
>02_04_0224 -
21059328-21059888,21060388-21060462,21060715-21060798,
21060866-21061183,21061511-21061722,21061766-21062030
Length = 504
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 435 QITSFVQIFSGVCAGDGVNTRLSERRHV 352
++ S ++F G AGD V R+ E HV
Sbjct: 18 EVQSLAELFGGPGAGDAVEWRMPENHHV 45
>01_06_1431 + 37317248-37317907
Length = 219
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 209 RVPSGPQLSTGASARTLPSPAARCIPPPRL 298
R P P S+ +++ T SPAA PPRL
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRL 119
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Frame = +1
Query: 181 SALRKASSVTRTVWP-AAVHRCK-----RPNTPI-------TSCTMHPSPPPANRS 309
SA AS+ + + P AA H C+ RP +P+ + +MHPSPPP S
Sbjct: 7 SAPSHASAASSSPLPFAAAHPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEGHS 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,752,572
Number of Sequences: 37544
Number of extensions: 577995
Number of successful extensions: 2301
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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