Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B10
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 42 0.003
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 42 0.003
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 41 0.005
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 41 0.005
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 41 0.007
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 41 0.007
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 41 0.007
EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6 pr... 39 0.028
AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice varia... 39 0.028
AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice varia... 39 0.028
AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice varia... 39 0.028
AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice varia... 39 0.028
AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice varia... 39 0.028
AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice varia... 39 0.028
AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6 pr... 39 0.028
AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5 pr... 39 0.028
AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4 pr... 39 0.028
AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3 pr... 39 0.028
AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2 pr... 39 0.028
AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1 pr... 39 0.028
AF312032-9|AAK21011.1| 915|Homo sapiens zonadhesin protein. 39 0.028
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 39 0.028
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 38 0.037
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 38 0.037
X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein. 38 0.049
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 38 0.049
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 38 0.049
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 38 0.049
AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein ... 38 0.065
AJ430032-1|CAD22550.1| 1156|Homo sapiens mucin 4 protein. 37 0.086
AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice var... 37 0.086
AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice var... 37 0.086
AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 pro... 37 0.086
AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein. 37 0.086
AJ242550-1|CAB85606.1| 1125|Homo sapiens MUC4/X apomucin protein. 37 0.086
AJ242549-1|CAB85605.1| 1176|Homo sapiens MUC4/Y apomucin protein. 37 0.086
AJ242548-1|CAB85604.1| 930|Homo sapiens sv8-MUC4 apomucin protein. 37 0.086
AJ242547-1|CAB85603.1| 814|Homo sapiens sv7-MUC4 apomucin protein. 37 0.086
AJ010901-1|CAB38059.1| 1156|Homo sapiens MUC4 protein. 37 0.086
AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein. 37 0.086
AK090684-1|BAC03505.1| 294|Homo sapiens protein ( Homo sapiens ... 36 0.15
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 36 0.20
AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein. 36 0.26
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 34 0.61
AE006464-14|AAK61246.1| 455|Homo sapiens unknown protein. 33 1.1
L76569-1|AAA99416.1| 1276|Homo sapiens fragile X E mental retard... 32 3.2
Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi dom... 31 4.3
BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing... 31 4.3
AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens ... 31 4.3
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 31 5.6
U48436-1|AAC82513.1| 1311|Homo sapiens fragile X mental retardat... 31 5.6
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 31 5.6
BC132683-1|AAI32684.1| 1301|Homo sapiens AFF2 protein protein. 31 5.6
AJ001550-1|CAA04822.1| 1272|Homo sapiens FMR2 protein protein. 31 5.6
AF012624-1|AAB71534.1| 1311|Homo sapiens familial mental retarda... 31 5.6
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 31 5.6
AB102644-1|BAC81113.1| 1272|Homo sapiens FMR2 protein. 31 5.6
BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance ... 30 9.9
AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance ... 30 9.9
AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance ... 30 9.9
AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated p... 30 9.9
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +3
Query: 96 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLA---RSC-PQVQAPEHSH 263
G Y ++ GL G+ N +P DDF+ PNG + +EFGN++ C P P S
Sbjct: 1380 GNYYQQMCGLCGNYNGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPTPCPPGSE 1439
Query: 264 HQLHDASLPPACEQVF 311
+ PP E+ +
Sbjct: 1440 DCIPSHKCPPELEKKY 1455
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 96 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLA---RSC-PQVQAPEHSH 263
G Y + GL G+ N +P DDF+ PNG + +EFGN++ C P P S
Sbjct: 2581 GNYYQLMCGLCGNYNGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSE 2640
Query: 264 HQLHDASLPPACEQVF 311
+ PP E+ +
Sbjct: 2641 GCIPSEECPPELEKKY 2656
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 96 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLA---RSC-PQVQAPEHSH 263
G Y + GL G+ N +P DDF+ PNG + +EFGN++ C P P S
Sbjct: 3782 GNYYQLMCGLCGNYNGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSE 3841
Query: 264 HQLHDASLPPACEQVF 311
+ PP E+ +
Sbjct: 3842 GCIPSEECPPELEKKY 3857
Score = 38.3 bits (85), Expect = 0.037
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARS 230
+ G+L GL G+ N DDF LPNG +S FG A+R+ S
Sbjct: 4978 FRGRLCGLCGNFNGNWSDDFVLPNGSAASSVETFGAAWRVPGS 5020
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 120 GLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 221
GL G+ N +P DDF P+G + EF ++++L
Sbjct: 609 GLCGNYNGDPADDFLTPDGALAPDAVEFASSWKL 642
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +3
Query: 96 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLA---RSC-PQVQAPEHSH 263
G Y ++ GL G+ N +P DDF+ PNG + +EFGN++ C P P S
Sbjct: 1380 GNYYQQMCGLCGNYNGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPTPCPPGSE 1439
Query: 264 HQLHDASLPPACEQVF 311
+ PP E+ +
Sbjct: 1440 DCIPSHKCPPELEKKY 1455
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 96 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLA---RSC-PQVQAPEHSH 263
G Y + GL G+ N +P DDF+ PNG + +EFGN++ C P P S
Sbjct: 2581 GNYYQLMCGLCGNYNGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSE 2640
Query: 264 HQLHDASLPPACEQVF 311
+ PP E+ +
Sbjct: 2641 GCIPSEECPPELEKKY 2656
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 120 GLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 221
GL G+ N +P DDF P+G + EF ++++L
Sbjct: 609 GLCGNYNGDPADDFLTPDGALAPDAVEFASSWKL 642
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + Y G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 971 FIRLHQDYKGRVCGLCGNFDDNAINDFATRSRSVVGDALEFGNSWKLSPSCPDALAPK 1028
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + Y G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 1012 FIRLHQDYKGRVCGLCGNFDDNAINDFATRSRSVVGDALEFGNSWKLSPSCPDALAPK 1069
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 40.7 bits (91), Expect = 0.007
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHS 260
++ + Y GK GL G+ N DDF P+G +FGNA++L C +Q +HS
Sbjct: 510 VKLSPVYAGKTCGLCGNYNGNQGDDFLTPSGLAEPRVEDFGNAWKLHGDCQDLQ-KQHS 567
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 40.7 bits (91), Expect = 0.007
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHS 260
++ + Y GK GL G+ N DDF P+G +FGNA++L C +Q +HS
Sbjct: 510 VKLSPVYAGKTCGLCGNYNGNQGDDFLTPSGLAEPRVEDFGNAWKLHGDCQDLQ-KQHS 567
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 40.7 bits (91), Expect = 0.007
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHS 260
++ + Y GK GL G+ N DDF P+G +FGNA++L C +Q +HS
Sbjct: 510 VKLSPVYAGKTCGLCGNYNGNQGDDFLTPSGLAEPRVEDFGNAWKLHGDCQDLQ-KQHS 567
>EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6
protein.
Length = 2721
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice variant 5
protein.
Length = 2601
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice variant 2
protein.
Length = 2689
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice variant 4
protein.
Length = 2624
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice variant 1
protein.
Length = 2724
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice variant 3
protein.
Length = 2812
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice variant 6
protein.
Length = 2721
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6
protein.
Length = 2721
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5
protein.
Length = 2601
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4
protein.
Length = 2624
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3
protein.
Length = 2812
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2
protein.
Length = 2689
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1
protein.
Length = 2724
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 2055 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 2099
>AF312032-9|AAK21011.1| 915|Homo sapiens zonadhesin protein.
Length = 915
Score = 38.7 bits (86), Expect = 0.028
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ ++ S+SEF N+++
Sbjct: 246 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEVANSDSEFVNSWK 290
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 38.7 bits (86), Expect = 0.028
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + Y ++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 1010 FIRLHQDYKARVCGLCGNFDDNAINDFATRSRSVVGDALEFGNSWKLSPSCPDALAPK 1067
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 38.3 bits (85), Expect = 0.037
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 KLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 245
K +I+ Y G + GL G+ ++ +DF + + +SE +FGN+++ A +CP V
Sbjct: 347 KRTTVFIKLAPSYKGTVCGLCGNFDHRSNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVS 406
Query: 246 A-PE 254
PE
Sbjct: 407 TNPE 410
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 38.3 bits (85), Expect = 0.037
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 KLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 245
K +I+ Y G + GL G+ ++ +DF + + +SE +FGN+++ A +CP V
Sbjct: 972 KRTTVFIKLAPSYKGTVCGLCGNFDHRSNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVS 1031
Query: 246 A-PE 254
PE
Sbjct: 1032 TNPE 1035
Score = 30.7 bits (66), Expect = 7.5
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Frame = +3
Query: 108 GKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSC---------PQVQAPEHS 260
G+++GL G+ N DDF+ +G + + + F N ++ +C P E +
Sbjct: 522 GQVQGLCGNFNGLEGDDFKTASGLVEATGAGFANTWKAQSTCHDKLDWLDDPCSLNIESA 581
Query: 261 HHQLHDASLPPACEQVFGGNIAAQDPVIVHGHVAFQT 371
++ H SL E FG +A DP + + T
Sbjct: 582 NYAEHWCSLLKKTETPFGRCHSAVDPAEYYKRCKYDT 618
>X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein.
Length = 850
Score = 37.9 bits (84), Expect = 0.049
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + + G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 17 FINLSPEFKGRVCGLCGNFDDIAVNDFATRSRSVVGDVLEFGNSWKLSPSCPDALAPK 74
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 37.9 bits (84), Expect = 0.049
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + + G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 1021 FINLSPEFKGRVCGLCGNFDDIAVNDFATRSRSVVGDVLEFGNSWKLSPSCPDALAPK 1078
Score = 33.1 bits (72), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 108 GKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 245
G+ GL G+ N+ DDFR +G + + + F N ++ +CP ++
Sbjct: 565 GQTCGLCGNFNSIQADDFRTLSGVVEATAAAFFNTFKTQAACPNIR 610
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 37.9 bits (84), Expect = 0.049
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + + G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 1024 FINLSPEFKGRVCGLCGNFDDIAVNDFATRSRSVVGDVLEFGNSWKLSPSCPDALAPK 1081
Score = 33.1 bits (72), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 108 GKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 245
G+ GL G+ N+ DDFR +G + + + F N ++ +CP ++
Sbjct: 567 GQTCGLCGNFNSIQADDFRTLSGVVEATAAAFFNTFKTQAACPNIR 612
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 37.9 bits (84), Expect = 0.049
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE 254
+I + + G++ GL G+ ++ +DF + + EFGN+++L+ SCP AP+
Sbjct: 1021 FINLSPEFKGRVCGLCGNFDDIAVNDFATRSRSVVGDVLEFGNSWKLSPSCPDALAPK 1078
Score = 33.1 bits (72), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 108 GKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQ 245
G+ GL G+ N+ DDFR +G + + + F N ++ +CP ++
Sbjct: 565 GQTCGLCGNFNSIQADDFRTLSGVVEATAAAFFNTFKTQAACPNIR 610
>AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein [AA
4671-5405] protein.
Length = 735
Score = 37.5 bits (83), Expect = 0.065
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYR 218
+ G+L GL G+ N DDF LPNG +S FG A+R
Sbjct: 308 FRGRLCGLCGNFNGNWSDDFVLPNGSAASSVETFGAAWR 346
>AJ430032-1|CAD22550.1| 1156|Homo sapiens mucin 4 protein.
Length = 1156
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 573 YQNRTEGLLGVWNNNPEDDFRMPNG 597
>AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice variant
sv21 protein.
Length = 2167
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 1586 YQNRTEGLLGVWNNNPEDDFRMPNG 1610
>AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice variant
sv20 protein.
Length = 1827
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 1586 YQNRTEGLLGVWNNNPEDDFRMPNG 1610
>AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 protein.
Length = 2117
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 1534 YQNRTEGLLGVWNNNPEDDFRMPNG 1558
>AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein.
Length = 2169
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 1586 YQNRTEGLLGVWNNNPEDDFRMPNG 1610
>AJ242550-1|CAB85606.1| 1125|Homo sapiens MUC4/X apomucin protein.
Length = 1125
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 542 YQNRTEGLLGVWNNNPEDDFRMPNG 566
>AJ242549-1|CAB85605.1| 1176|Homo sapiens MUC4/Y apomucin protein.
Length = 1176
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 593 YQNRTEGLLGVWNNNPEDDFRMPNG 617
>AJ242548-1|CAB85604.1| 930|Homo sapiens sv8-MUC4 apomucin protein.
Length = 930
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 347 YQNRTEGLLGVWNNNPEDDFRMPNG 371
>AJ242547-1|CAB85603.1| 814|Homo sapiens sv7-MUC4 apomucin protein.
Length = 814
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 573 YQNRTEGLLGVWNNNPEDDFRMPNG 597
>AJ010901-1|CAB38059.1| 1156|Homo sapiens MUC4 protein.
Length = 1156
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 573 YQNRTEGLLGVWNNNPEDDFRMPNG 597
>AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein.
Length = 2169
Score = 37.1 bits (82), Expect = 0.086
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNG 176
Y + GLLG NN P DDFR+PNG
Sbjct: 1586 YQNRTEGLLGVWNNNPEDDFRMPNG 1610
>AK090684-1|BAC03505.1| 294|Homo sapiens protein ( Homo sapiens
cDNA FLJ33365 fis, clone BRACE2005460, moderately
similar to Xenopus laevis mRNA for Kielin. ).
Length = 294
Score = 36.3 bits (80), Expect = 0.15
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 221
+ G Y G+ GL G+ N DD + P G + SE+ FGN++++
Sbjct: 159 VSVPGSYQGRTCGLCGNFNGFAQDDLQGPEGLLLPSEAAFGNSWQV 204
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 35.9 bits (79), Expect = 0.20
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 221
I G Y+ GL G+ N P DDF P+G+ S + G ++R+
Sbjct: 447 ISVPGSYINSTCGLCGNYNKNPLDDFLRPDGRPAMSVLDLGESWRV 492
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 120 GLLGDGNNEPYDDFRLPNGKICTSESEFGNAY 215
GL G N P DD +P G + +S +EFG ++
Sbjct: 1239 GLCGRYNGNPDDDLEMPMGLLASSVNEFGQSW 1270
>AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein.
Length = 2379
Score = 35.5 bits (78), Expect = 0.26
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 84 IEANGFYLGKLRGLLGDGNNEPYDDFRLPNG-KICTSESEFGNAYR 218
IE Y GK+ G+ G+ N+E D+ +P+ K+ S+SEF N+++
Sbjct: 1987 IEIPTTYYGKVCGMCGNFNDEEEDELMMPSDEKLANSDSEFVNSWK 2032
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 34.3 bits (75), Expect = 0.61
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 130 ETVTTSLTMTSGYLMERSALRKASSVTR-TVWPAAVHRCKRPNTPITSCTMHPSPPPANR 306
ET+TT++T T + +S+T T WP A + T I S T PS
Sbjct: 148 ETLTTAMTSTPPITSSITPTNTVTSMTTMTSWPTATNTLSSLTTNILSSTPVPSTERTTS 207
Query: 307 SSGGISPLRTL 339
+ I+P+ TL
Sbjct: 208 HTTNINPVSTL 218
>AE006464-14|AAK61246.1| 455|Homo sapiens unknown protein.
Length = 455
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/57 (36%), Positives = 24/57 (42%)
Frame = +2
Query: 266 PAARCIPPPRLRTGLRGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTPLKICTKLVIW 436
PAA C P P L R RS P CR +D +F P P + CT L W
Sbjct: 18 PAAPCAPRPVLAGPPRQRTERSSPGAAGPFCR-ADMVLFFPGPCSFFAEDCTALSAW 73
>L76569-1|AAA99416.1| 1276|Homo sapiens fragile X E mental
retardation syndrome protein protein.
Length = 1276
Score = 31.9 bits (69), Expect = 3.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ + P PPPA ++SGG
Sbjct: 414 TATELYQAVEKAKPRNNPVNPPLVTPQPPPAVQASGG 450
>Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi domain
(SCR repeat) containing protein similar to Mucins)
protein.
Length = 822
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
+L GLLG NN+P DDF L +G++
Sbjct: 588 FLTHTHGLLGTLNNDPTDDFTLHSGRV 614
>BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing 2
protein.
Length = 822
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
+L GLLG NN+P DDF L +G++
Sbjct: 588 FLTHTHGLLGTLNNDPTDDFTLHSGRV 614
>AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22778 fis, clone KAIA1714. ).
Length = 619
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
+L GLLG NN+P DDF L +G++
Sbjct: 385 FLTHTHGLLGTLNNDPTDDFTLHSGRV 411
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 31.1 bits (67), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 250 PNTPITSCTMHPSPPPANRSSG 315
P P+T +HP+PPPA+ ++G
Sbjct: 844 PCPPVTQSPLHPTPPPASTAAG 865
>U48436-1|AAC82513.1| 1311|Homo sapiens fragile X mental retardation
protein FMR2p protein.
Length = 1311
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ P PPPA ++SGG
Sbjct: 447 TATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGG 483
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 31.1 bits (67), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 250 PNTPITSCTMHPSPPPANRSSG 315
P P+T +HP+PPPA+ ++G
Sbjct: 844 PCPPVTQSPLHPTPPPASTAAG 865
>BC132683-1|AAI32684.1| 1301|Homo sapiens AFF2 protein protein.
Length = 1301
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ P PPPA ++SGG
Sbjct: 437 TATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGG 473
>AJ001550-1|CAA04822.1| 1272|Homo sapiens FMR2 protein protein.
Length = 1272
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ P PPPA ++SGG
Sbjct: 408 TATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGG 444
>AF012624-1|AAB71534.1| 1311|Homo sapiens familial mental
retardation protein 2 protein.
Length = 1311
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ P PPPA ++SGG
Sbjct: 447 TATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGG 483
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 31.1 bits (67), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 250 PNTPITSCTMHPSPPPANRSSG 315
P P+T +HP+PPPA+ ++G
Sbjct: 874 PCPPVTQSPLHPTPPPASTAAG 895
>AB102644-1|BAC81113.1| 1272|Homo sapiens FMR2 protein.
Length = 1272
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 208 TRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGG 318
T T AV + K N P+ P PPPA ++SGG
Sbjct: 408 TATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGG 444
>BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 310 SGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGR 441
SGG L LSL + M F+ A I+ + DAA DL ++G+
Sbjct: 1086 SGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQ 1129
>AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 310 SGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGR 441
SGG L LSL + M F+ A I+ + DAA DL ++G+
Sbjct: 1086 SGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQ 1129
>AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 310 SGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGR 441
SGG L LSL + M F+ A I+ + DAA DL ++G+
Sbjct: 1086 SGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQ 1129
>AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated
protein-E protein.
Length = 1197
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 310 SGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGR 441
SGG L LSL + M F+ A I+ + DAA DL ++G+
Sbjct: 1086 SGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQ 1129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,844,303
Number of Sequences: 237096
Number of extensions: 2947105
Number of successful extensions: 9577
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 8567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9543
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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