BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B10
(893 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 77 2e-14
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 77 2e-14
AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p pro... 54 3e-07
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 54 3e-07
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 54 3e-07
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 49 1e-05
AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA... 39 0.011
AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin p... 39 0.011
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 34 0.30
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 30 3.7
AY089641-1|AAL90379.1| 322|Drosophila melanogaster RE65335p pro... 30 3.7
AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro... 30 3.7
AE014298-98|AAF45542.2| 322|Drosophila melanogaster CG13362-PA ... 30 3.7
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA... 30 3.7
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB... 30 3.7
AY047533-1|AAK77265.1| 296|Drosophila melanogaster GH04176p pro... 30 4.9
AE013599-2449|AAF57879.1| 296|Drosophila melanogaster CG10939-P... 30 4.9
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro... 29 6.5
AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p pro... 29 6.5
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P... 29 6.5
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P... 29 6.5
AY128423-1|AAM75016.1| 357|Drosophila melanogaster GH14769p pro... 29 8.6
AJ293622-1|CAC00683.1| 351|Drosophila melanogaster PAR-1 ser/th... 29 8.6
AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA... 29 8.6
AE013599-2905|AAX52692.1| 357|Drosophila melanogaster CG8201-PQ... 29 8.6
AE013599-2904|AAS64803.1| 993|Drosophila melanogaster CG8201-PO... 29 8.6
AE013599-2903|AAS64802.1| 993|Drosophila melanogaster CG8201-PJ... 29 8.6
AE013599-2902|AAS64801.1| 993|Drosophila melanogaster CG8201-PI... 29 8.6
AE013599-2901|AAS64800.1| 993|Drosophila melanogaster CG8201-PH... 29 8.6
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 77.4 bits (182), Expect = 2e-14
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = +3
Query: 48 GSSCTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLAR 227
G CTS L+VC+I NGFY K RGLLG+GN EPYDDF L +G + + + GN Y + +
Sbjct: 2889 GIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDDFLLIDGTLAENSAALGNDYGVGK 2948
Query: 228 SCPQVQAPEHSHHQLHDASLPPACEQVFG 314
C + E ++Q + C ++FG
Sbjct: 2949 -CTAI---EFDNNQFKSSKREEMCSELFG 2973
Score = 54.8 bits (126), Expect = 2e-07
Identities = 28/116 (24%), Positives = 54/116 (46%)
Frame = +1
Query: 349 MDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADKPR 528
+D P+R+AC A+ + AC + +LP C+KC
Sbjct: 2985 LDSRPYRKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQH 3044
Query: 529 DIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLIDSLKSKHITDVKV 696
D GD + K+PN + D++ V+ + +++ P ++ + +SL+S+ +DV+V
Sbjct: 3045 DFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRESLRSRGFSDVQV 3099
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 77.4 bits (182), Expect = 2e-14
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = +3
Query: 48 GSSCTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLAR 227
G CTS L+VC+I NGFY K RGLLG+GN EPYDDF L +G + + + GN Y + +
Sbjct: 2889 GIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDDFLLIDGTLAENSAALGNDYGVGK 2948
Query: 228 SCPQVQAPEHSHHQLHDASLPPACEQVFG 314
C + E ++Q + C ++FG
Sbjct: 2949 -CTAI---EFDNNQFKSSKRQEMCSELFG 2973
Score = 54.8 bits (126), Expect = 2e-07
Identities = 28/116 (24%), Positives = 54/116 (46%)
Frame = +1
Query: 349 MDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADKPR 528
+D P+R+AC A+ + AC + +LP C+KC
Sbjct: 2985 LDSRPYRKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQH 3044
Query: 529 DIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLIDSLKSKHITDVKV 696
D GD + K+PN + D++ V+ + +++ P ++ + +SL+S+ +DV+V
Sbjct: 3045 DFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRESLRSRGFSDVQV 3099
>AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p
protein.
Length = 719
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 57 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCP 236
C + ++C+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C
Sbjct: 255 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCR 313
Query: 237 Q 239
Q
Sbjct: 314 Q 314
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 57 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCP 236
C + ++C+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C
Sbjct: 3881 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCR 3939
Query: 237 Q 239
Q
Sbjct: 3940 Q 3940
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 57 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCP 236
C + ++C+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C
Sbjct: 3910 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCR 3968
Query: 237 Q 239
Q
Sbjct: 3969 Q 3969
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p
protein.
Length = 1074
Score = 48.8 bits (111), Expect = 1e-05
Identities = 20/72 (27%), Positives = 40/72 (55%)
Frame = +1
Query: 481 VLPNVCVKCTDADKPRDIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLID 660
+LP C+KC D GD + K+PN + D++ V+ + +++ P ++ + +
Sbjct: 752 LLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRE 810
Query: 661 SLKSKHITDVKV 696
SL+S+ +DV+V
Sbjct: 811 SLRSRGFSDVQV 822
>AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA
protein.
Length = 3843
Score = 38.7 bits (86), Expect = 0.011
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHS 260
YI+A G+ +GL G N+ DDF P G + T+ F + +R +C Q +
Sbjct: 984 YIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC---QFKAET 1040
Query: 261 HHQLHDASLPP 293
H H +L P
Sbjct: 1041 HQGPHPCTLNP 1051
Score = 35.9 bits (79), Expect = 0.075
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 251
Y++ + K+ GL G+ N DD + P+ + TS FG+A++L C AP
Sbjct: 1468 YVKLGNEWRQKVSGLCGNYNGNSLDDMQTPSMGLETSPMLFGHAWKLQPHCSAPVAP 1524
>AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin
protein.
Length = 3843
Score = 38.7 bits (86), Expect = 0.011
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHS 260
YI+A G+ +GL G N+ DDF P G + T+ F + +R +C Q +
Sbjct: 984 YIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC---QFKAET 1040
Query: 261 HHQLHDASLPP 293
H H +L P
Sbjct: 1041 HQGPHPCTLNP 1051
Score = 35.9 bits (79), Expect = 0.075
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 81 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 251
Y++ + K+ GL G+ N DD + P+ + TS FG+A++L C AP
Sbjct: 1468 YVKLGNEWRQKVSGLCGNYNGNSLDDMQTPSMGLETSPMLFGHAWKLQPHCSAPVAP 1524
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 33.9 bits (74), Expect = 0.30
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 238 RC--KRPNTPITSCTMHPSPPPANRSSGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAK 411
RC KRP + S P+P PA S ++S SP R+ H+ + D
Sbjct: 1762 RCLSKRPADAVPSTPSVPTPVPALSSKVAKRSRSSISYPAQSSPKRKISTHSTSSKDDEF 1821
Query: 412 DLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADKPRDIGDSYEFKVPN 564
D+ + +A L T P V+P V DAD+P G S + VP+
Sbjct: 1822 DIDAI--IKAPIAKLQKTA--PKVVPQPSVP-NDADEPYSPGGSDDELVPS 1867
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 514 ADKPRDIGDSYEFKV-PNKQADIILSVETTESNAKTYKDIVVPLVSH---LIDSLKSKHI 681
AD +D+ + F + PNKQ + ET +S +++ V L+ LID + + H
Sbjct: 346 ADYLKDLAQNDNFSIDPNKQ-----NTETLKSTLGFFRNTYVELMEKYCSLIDQIPAMHF 400
Query: 682 TDVKVFLGRTYLQISI 729
++ F T+L++ +
Sbjct: 401 NEIAGFQPNTFLKLKV 416
>AY089641-1|AAL90379.1| 322|Drosophila melanogaster RE65335p
protein.
Length = 322
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 199 SSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGGISPLRTLSL 345
++ T T PA RP+T TS T P PPP +S S T SL
Sbjct: 122 TTTTTTTTPAPT---TRPSTTTTSTTPPPVPPPPQSTSSSFSEGPTSSL 167
>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p
protein.
Length = 1052
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 79 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNT 258
+T T ST V +TS + +S + S+ +SS + T V + P
Sbjct: 67 STTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHT----RVRKSSNPPP 122
Query: 259 -PITSCTMHPSPPP 297
PITSC + P PPP
Sbjct: 123 QPITSCPLSPPPPP 136
>AE014298-98|AAF45542.2| 322|Drosophila melanogaster CG13362-PA
protein.
Length = 322
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 199 SSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGGISPLRTLSL 345
++ T T PA RP+T TS T P PPP +S S T SL
Sbjct: 122 TTTTTTTTPAPT---TRPSTTTTSTTPPPVPPPPQSTSSSFSEGPTSSL 167
>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
protein.
Length = 1487
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 514 ADKPRDIGDSYEFKV-PNKQADIILSVETTESNAKTYKDIVVPLVSH---LIDSLKSKHI 681
AD +D+ + F + PNKQ + ET +S +++ V L+ LID + + H
Sbjct: 346 ADYLKDLAQNDNFSIDPNKQ-----NTETLKSTLGFFRNTYVELMEKYCSLIDQIPAMHF 400
Query: 682 TDVKVFLGRTYLQISI 729
++ F T+L++ +
Sbjct: 401 NEIAGFQPNTFLKLKV 416
>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
isoform B protein.
Length = 1052
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 79 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNT 258
+T T ST V +TS + +S + S+ +SS + T V + P
Sbjct: 67 STTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHT----RVRKSSNPPP 122
Query: 259 -PITSCTMHPSPPP 297
PITSC + P PPP
Sbjct: 123 QPITSCPLSPPPPP 136
>AY047533-1|AAK77265.1| 296|Drosophila melanogaster GH04176p
protein.
Length = 296
Score = 29.9 bits (64), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 217 VWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGGIS 324
+ P V +P++PI + T+ +PPP + + GI+
Sbjct: 189 ITPPPVQNGSKPSSPINNNTLMSTPPPPSATKAGIN 224
>AE013599-2449|AAF57879.1| 296|Drosophila melanogaster CG10939-PA
protein.
Length = 296
Score = 29.9 bits (64), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 217 VWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGGIS 324
+ P V +P++PI + T+ +PPP + + GI+
Sbjct: 189 ITPPPVQNGSKPSSPINNNTLMSTPPPPSATKAGIN 224
>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p protein.
Length = 1240
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p
protein.
Length = 868
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
++ K GL G+ + DDF LPNG++
Sbjct: 412 FINKTAGLFGNWSFNKLDDFMLPNGQV 438
>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
isoform B protein.
Length = 1431
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
isoform A protein.
Length = 1431
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 102 YLGKLRGLLGDGNNEPYDDFRLPNGKI 182
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AY128423-1|AAM75016.1| 357|Drosophila melanogaster GH14769p
protein.
Length = 357
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AJ293622-1|CAC00683.1| 351|Drosophila melanogaster PAR-1 ser/thr
kinase N2 protein.
Length = 351
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
protein.
Length = 1027
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 209 RVPSGPQLSTGASARTLPSPAARCIPPP 292
RVP+ P L+ AR+ P+PAA PPP
Sbjct: 454 RVPAPPALAPAPPARS-PTPAAAAPPPP 480
>AE013599-2905|AAX52692.1| 357|Drosophila melanogaster CG8201-PQ,
isoform Q protein.
Length = 357
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AE013599-2904|AAS64803.1| 993|Drosophila melanogaster CG8201-PO,
isoform O protein.
Length = 993
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AE013599-2903|AAS64802.1| 993|Drosophila melanogaster CG8201-PJ,
isoform J protein.
Length = 993
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AE013599-2902|AAS64801.1| 993|Drosophila melanogaster CG8201-PI,
isoform I protein.
Length = 993
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
>AE013599-2901|AAS64800.1| 993|Drosophila melanogaster CG8201-PH,
isoform H protein.
Length = 993
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 314 PEDLFAGGGEGCIVQLVMGVFGRLHLWTAA 225
P D F EGC V++ GVF RL + T A
Sbjct: 181 PSDSFHKMSEGCFVRMADGVFRRLEVPTKA 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,761,035
Number of Sequences: 53049
Number of extensions: 948667
Number of successful extensions: 4007
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4006
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -