Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_B09
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 36 0.031
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 34 0.16
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 33 0.22
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 30 2.7
Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical p... 29 3.5
Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical pr... 29 6.2
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 28 8.1
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 28 8.1
U10414-11|AAA19078.1| 187|Caenorhabditis elegans Hypothetical p... 28 8.1
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 601 RSKHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIQ--WL--CGGVLISERFVLTA 768
R + C + I G A ++E P V + +V NI W C G L S R +LTA
Sbjct: 29 RLEDCGKNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTA 88
Query: 769 GHCLSS 786
HC ++
Sbjct: 89 THCAAT 94
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 628 DELIIGGTDAGVNEYPHMVLLGYGDDVANI-QWLCGGVLISERFVLTAGHCLS 783
D +IGG+++ + +P V L ++ + CGG LI FVLTA HC +
Sbjct: 55 DHRLIGGSESSPHSWPWTVQL-----LSRLGHHRCGGSLIDPNFVLTAAHCFA 102
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 637 IIGGT--DAGVNEYPHMVLLGYGDDVANIQWLCGGVLISERFVLTAGHCLSSXEVGAVRY 810
IIGG D G N +V YGD+ I LCG +I + +++TA HC + + Y
Sbjct: 38 IIGGNSIDDGANWMAKLV--SYGDNGQGI--LCGATVIDDFWLVTAAHCALQLQTRSFVY 93
Query: 811 V 813
V
Sbjct: 94 V 94
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 682 VLLGYGDDVANIQWLCGGVLISERFVLTAGHCLSSXEVGAV 804
V+ + D N+ CGGVLI+ V+T+ HC+ S + AV
Sbjct: 34 VITRFPDGTTNV---CGGVLIAPSIVITSAHCVFSGDDFAV 71
>Z81115-2|CAB03292.1| 314|Caenorhabditis elegans Hypothetical
protein T05D4.2 protein.
Length = 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 EYVPPSYDYQSNNGDKKCEDVPADLTS-PKTGQKAWDKCIEYQEQ 552
E++ ++ Y NN +C ++ D+ S P+ K D+C EYQ Q
Sbjct: 43 EHLTSAHSYTKNN-HCQCYEIAVDICSEPRVRVKGLDRCWEYQIQ 86
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 849 DGSVSAGEGADIHVSDCANLXTG*AVSGCEHEALTDEHPPAQPLDVRDIVTVAEQDHV 676
D ++ + D DCANL A GC T+ P + PLD+ T E +
Sbjct: 336 DNQLAIFQSPDPTNPDCANLNITTASGGCTGIVFTNAAPASGPLDLAISTTYVENPSI 393
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 724 LCGGVLISERFVLTAGHC 777
+CGG LI+ + VLTA HC
Sbjct: 61 ICGGTLITLKHVLTAAHC 78
>Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical
protein T04A8.3 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 439 YDYQSNNGD--KKCEDVPADLTSPKTGQKAWDKCIEYQEQLVYPCEKGVALTGEISRSKH 612
+D NN D KKC D+ A L+S T ++ K ++ VYP + +A+ R +
Sbjct: 295 HDMSMNNDDAEKKCNDMGAHLSSFTTYEEL--KLLDEMILEVYPNDNNIAVWLGAKRREE 352
Query: 613 CHHDADELIIGGTDAGVNE 669
C D + GG +++
Sbjct: 353 C-GDLSKNFTGGYSKDIHD 370
>Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical
protein T28D6.9 protein.
Length = 101
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/27 (37%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 501 RRQIRRYILAFLV-AIVGLVIIGGWHV 424
RRQIR+Y++A +V +I ++++ W +
Sbjct: 50 RRQIRKYVIASIVGSIFWIIVLSAWEI 76
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Frame = +1
Query: 541 YQEQLVYPCEKGVALTGEISRSKHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDV---- 708
+Q++L+ ++LTG+ H HDAD + + T V P + Y +DV
Sbjct: 165 FQQKLLPVGAPQISLTGQSEIYFHPRHDADYIALPCT---VQGNPKPTVAWYKNDVEVLS 221
Query: 709 ---ANIQWLCGG----VLISERFVLTAGHCLSSXEVGAVR 807
+N+ +L G V S ++ HC + +G VR
Sbjct: 222 PSMSNVSYLLSGGNLLVPASSTLAYSSFHCTARNSLGEVR 261
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Frame = +1
Query: 541 YQEQLVYPCEKGVALTGEISRSKHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDV---- 708
+Q++L+ ++LTG+ H HDAD + + T V P + Y +DV
Sbjct: 134 FQQKLLPVGAPQISLTGQSEIYFHPRHDADYIALPCT---VQGNPKPTVAWYKNDVEVLS 190
Query: 709 ---ANIQWLCGG----VLISERFVLTAGHCLSSXEVGAVR 807
+N+ +L G V S ++ HC + +G VR
Sbjct: 191 PSMSNVSYLLSGGNLLVPASSTLAYSSFHCTARNSLGEVR 230
>U10414-11|AAA19078.1| 187|Caenorhabditis elegans Hypothetical
protein F42A10.7 protein.
Length = 187
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 620 WWQCLLRLISPVSATPFSHGYTSCS*YSIHLSHAFCPVLGDVRSAGTSSHFLSPLL 453
WWQC + ++ATP+ Y IHLS P++ + +S ++SP L
Sbjct: 41 WWQCSSGPVQFLNATPYDSTGKQYE-YPIHLSQ---PIVVKTQINNPTSTYVSPNL 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,428,991
Number of Sequences: 27780
Number of extensions: 381442
Number of successful extensions: 1024
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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