Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_A05
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 34 0.032
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.30
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.1
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 28 2.1
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 3.7
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 3.7
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.7
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 27 4.9
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 26 6.5
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 6.5
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 6.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 6.5
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 26 8.5
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 8.5
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +2
Query: 473 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 643
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 644 DVDVGLETAQKTNEIAKAVEATTYAVNIRDDAEFLPI 754
DVD+ LET +K ++ E Y N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.30
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3
Query: 741 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 562
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 561 LLLSS 547
SS
Sbjct: 315 SSFSS 319
Score = 25.8 bits (54), Expect = 8.5
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -3
Query: 702 STAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGL----LLSSGCFC 535
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 534 FSGKVIFNTSFS*TQLPSEFTS 469
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 726 MLTAYVVASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 553
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 209 ESMLDTHSLWSNLANEMQHLDDMMKELSLKFXSIINEGRVEGDKYQISIHLPGYEQKDIN 388
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 389 VKAKN 403
K N
Sbjct: 163 SKKLN 167
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -3
Query: 705 ASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGC----F 538
AS +F+ S + W S+T S N+ G+ A GLL GC F
Sbjct: 343 ASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGLLTPIGCSPKKF 402
Query: 537 CFSGKVIFNTSFS 499
FS +V FN S S
Sbjct: 403 AFS-EVPFNDSNS 414
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 374 QKDI-NVKAKNGVLMVQANSAFNHYLKIQNPPWDVNSEGSWVYEKDVLKITFPLKQKQPE 550
Q+D+ N K G +V A +++ + + PP+ GSWV + ++ E
Sbjct: 2000 QRDMFNEVLKYGSYIVDALASYKQPVFVYIPPFSELRGGSWVVVDPTIN-EDQMEMYADE 2058
Query: 551 DSKRPVAEPTETTPTNVSREEM 616
+S+ V EP RE++
Sbjct: 2059 ESRAGVLEPEGMVSIKFRREKL 2080
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 560 RPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTYAVNIRDDA 739
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 740 E 742
E
Sbjct: 178 E 178
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -3
Query: 759 YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVS 580
Y + ++S +S++ AY+ S + S V ++ PTS+S + V S+ R + G S
Sbjct: 387 YSVVQSSLASIISNAYIATSKSGLNSGVSTLLASPTSSS----TFVTSLLRRSSIDGSAS 442
Query: 579 VGSAT 565
SA+
Sbjct: 443 SSSAS 447
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Frame = +2
Query: 410 LMVQANSAFNHYLKIQNPPWDVNSEGSWVYEKDVLKITFPLKQK---------QPEDSKR 562
L V AN+ F H+++ NP + + W + I+F + PE + +
Sbjct: 98 LAVAANTKFTHFIRTTNPKHQASVQEFWKTIQKAGMISFERHEGWYCVSDETFYPESAIQ 157
Query: 563 PVAEPTETTPTNVSRE---EMEFTTESN 637
V +P VS E E+++++E N
Sbjct: 158 KVVDPATKQEKRVSMETGKEVQWSSEMN 185
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 121 AAVSAAPQYYHGSSHWPYHHYDPVQSL 201
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 741 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTS 643
S S+ + +A+T+F SLV A + P+STS
Sbjct: 463 SVSATPTVSMSIAATSFGSSLVLTASASPSSTS 495
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 26.2 bits (55), Expect = 6.5
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +2
Query: 227 HSLWSNLANEMQHLDD--MMKELSL-KFXSI-INEGRVEGDKYQISIHLPGY---EQKDI 385
H++ N A E ++D ++K +S F S+ + + R GD + I I + + I
Sbjct: 573 HTIVPNSAPEHPSINDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVI 632
Query: 386 NVKAKNGVLMVQANSAF 436
NV+A+ +LM Q S F
Sbjct: 633 NVRAERAILMSQGESPF 649
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +2
Query: 497 YEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQK 676
Y V ++ P Q + + +ET P+ S E F T S + + E
Sbjct: 986 YTSAVTELPDPNHQLEMSTTTHVQHPNSETIPS--STENQYFDTTSGAFEANSNTEVTVN 1043
Query: 677 TNEIAKAVEATTYAVNIRDDAEFLPI 754
+NE+++ + T + DD E LP+
Sbjct: 1044 SNEVSQPFDFDTANESDNDDDE-LPV 1068
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 260 QHLDDMMKELSLKFXSIINEGRVEG 334
+HLDD+++ S F S+I+ EG
Sbjct: 294 KHLDDLLENQSTGFFSMIDSSNFEG 318
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 8.5
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 455 QNPPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETT--PTNVSREEMEFTT 628
+ PP ++ + + +K+ K T K + S P + T P+N S ++ T
Sbjct: 92 RRPPRQISIDSA---KKEETKNTGSTKAADTKSSVEATISPLKDTKSPSNASVFPIKPTE 148
Query: 629 E--SNVRDVDVGLETAQKTNEIAKAVEATT 712
S +D + E ++ KAVEATT
Sbjct: 149 SKTSTTKDSETAKEEDDASSSTTKAVEATT 178
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,335,255
Number of Sequences: 5004
Number of extensions: 68452
Number of successful extensions: 229
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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