Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_A05
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017188-1|AAH17188.1| 837|Homo sapiens TEL2, telomere maintena... 35 0.36
AL031705-4|CAC37283.1| 837|Homo sapiens protein ( Human DNA seq... 35 0.36
AE006467-10|AAK61284.1| 837|Homo sapiens KIAA0683 protein. 35 0.36
AB014583-1|BAA31658.3| 844|Homo sapiens KIAA0683 protein protein. 35 0.36
DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4 pro... 31 4.4
AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein. 31 4.4
AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein. 31 4.4
>BC017188-1|AAH17188.1| 837|Homo sapiens TEL2, telomere maintenance
2, homolog (S. cerevisiae) protein.
Length = 837
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 184 DPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKRR--TRGRRQVSDIYS 357
+ + +L S + GH F ++ +R LG + A+ + + + R ++ S
Sbjct: 14 EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFSPVLRCLASRLS 71
Query: 358 PAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 483
PAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 72 PAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AL031705-4|CAC37283.1| 837|Homo sapiens protein ( Human DNA
sequence from clone LA16c-305C8 on chromosome 16. ).
Length = 837
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 184 DPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKRR--TRGRRQVSDIYS 357
+ + +L S + GH F ++ +R LG + A+ + + + R ++ S
Sbjct: 14 EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFSPVLRCLASRLS 71
Query: 358 PAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 483
PAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 72 PAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AE006467-10|AAK61284.1| 837|Homo sapiens KIAA0683 protein.
Length = 837
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 184 DPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKRR--TRGRRQVSDIYS 357
+ + +L S + GH F ++ +R LG + A+ + + + R ++ S
Sbjct: 14 EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFSPVLRCLASRLS 71
Query: 358 PAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 483
PAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 72 PAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AB014583-1|BAA31658.3| 844|Homo sapiens KIAA0683 protein protein.
Length = 844
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 184 DPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKRR--TRGRRQVSDIYS 357
+ + +L S + GH F ++ +R LG + A+ + + + R ++ S
Sbjct: 21 EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFSPVLRCLASRLS 78
Query: 358 PAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 483
PAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 79 PAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 123
>DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4
protein.
Length = 1208
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +1
Query: 139 PQYYHGSSHWPYHHYDPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKR 318
PQ S+ YH P R+GK G P L RHD G V + K
Sbjct: 308 PQPCSSPSNPRYHGLSPSSQARAGKAEG-----TAPLHIFPRLARHDRGNYVRLNMKQKH 362
Query: 319 RTRGRRQVSDIY-SPAWLRTERHQRESEKWSADGA 420
RGR S + AW ++ +++ E + GA
Sbjct: 363 YVRGRALRSRLLRKQAW--KQKWRKKGECFGGGGA 395
>AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein.
Length = 1208
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +1
Query: 139 PQYYHGSSHWPYHHYDPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKR 318
PQ S+ YH P R+GK G P L RHD G V + K
Sbjct: 308 PQPCSSPSNPRYHGLSPSSQARAGKAEG-----TAPLHIFPRLARHDRGNYVRLNMKQKH 362
Query: 319 RTRGRRQVSDIY-SPAWLRTERHQRESEKWSADGA 420
RGR S + AW ++ +++ E + GA
Sbjct: 363 YVRGRALRSRLLRKQAW--KQKWRKKGECFGGGGA 395
>AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein.
Length = 1208
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +1
Query: 139 PQYYHGSSHWPYHHYDPVQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVXQHYKR 318
PQ S+ YH P R+GK G P L RHD G V + K
Sbjct: 308 PQPCSSPSNPRYHGLSPSSQARAGKAEG-----TAPLHIFPRLARHDRGNYVRLNMKQKH 362
Query: 319 RTRGRRQVSDIY-SPAWLRTERHQRESEKWSADGA 420
RGR S + AW ++ +++ E + GA
Sbjct: 363 YVRGRALRSRLLRKQAW--KQKWRKKGECFGGGGA 395
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,314,365
Number of Sequences: 237096
Number of extensions: 2721532
Number of successful extensions: 8147
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8147
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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