Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_A04
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 177 1e-44
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 177 1e-44
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 165 3e-41
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 131 9e-31
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 52 6e-07
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 35 0.10
04_04_1273 - 32307273-32307569,32307659-32307791,32307874-323081... 29 5.1
12_02_1170 - 26663491-26663602,26663999-26664104,26664613-266648... 29 6.7
11_04_0091 - 13392864-13392950,13393534-13393579,13393706-133938... 29 6.7
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 29 6.7
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663... 28 8.9
09_06_0081 + 20745627-20748144,20748211-20748308 28 8.9
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 28 8.9
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 177 bits (431), Expect = 1e-44
Identities = 80/148 (54%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Frame = +3
Query: 150 RAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 326
+A+AVL S+E ++G I F+Q DG V G ++GL PG +GFHVH GD + GC+STG H
Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 327 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 506
FNP K+HG P D NRH GDLGN+ + + +++ D QI L+G H IIGRAVV+H
Sbjct: 63 FNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADP 122
Query: 507 DDYGKSDHPDSRKTGNAGGRVACGVIGI 590
DD GK H S+ TGNAGGRVACG+IG+
Sbjct: 123 DDLGKGGHELSKTTGNAGGRVACGIIGL 150
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 177 bits (430), Expect = 1e-44
Identities = 81/151 (53%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Frame = +3
Query: 141 TPSRAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLST 317
T +A+ VL S+E ++G I F Q DG V G ++GL PG +GFH+H GD + GC+ST
Sbjct: 118 TMVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMST 177
Query: 318 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 497
G H+NP K+HG P D RH GDLGNV E+ + I +VD QI L+GP+ IIGRAVV+H
Sbjct: 178 GPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 237
Query: 498 EKADDYGKSDHPDSRKTGNAGGRVACGVIGI 590
DD GK H S+ TGNAGGRVACG+IG+
Sbjct: 238 ADPDDLGKGGHELSKTTGNAGGRVACGIIGL 268
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 165 bits (402), Expect = 3e-41
Identities = 76/148 (51%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Frame = +3
Query: 150 RAIAVLS-TETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 326
+A+AVL T + G +T TQ G V +TGL PG +GFH+HE GD + GC+STG H
Sbjct: 53 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH 112
Query: 327 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 506
FNP + HG P D RH GDLGN+V + + +VD QI LSGP+ ++GRA V+HE
Sbjct: 113 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELE 172
Query: 507 DDYGKSDHPDSRKTGNAGGRVACGVIGI 590
DD GK H S TGNAGGR+ACGV+G+
Sbjct: 173 DDLGKGGHELSLSTGNAGGRLACGVVGL 200
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 131 bits (316), Expect = 9e-31
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = +3
Query: 198 FTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRH 377
F G V+G +TGL PG +GFH+H GD + GC STG HFNP +K HG P+D RH
Sbjct: 30 FQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGAPSDDERH 89
Query: 378 VGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGK 521
VGDLGN+V +++ + I + D QISLSGPH I+GRAVV+H +DD G+
Sbjct: 90 VGDLGNIVANKDGVADIFIKDLQISLSGPHSILGRAVVVHADSDDLGR 137
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 52.0 bits (119), Expect = 6e-07
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = +3
Query: 147 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 326
S A+A I G + QV V+ +GL PG++G+ ++E GDL+ G STG
Sbjct: 165 SAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKV 224
Query: 327 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 506
+NP D+ N+ +GDLG + E ++ +++ + +IGR++ L+
Sbjct: 225 YNP--SDYRS----NKPLGDLGTLEAGEKGEAQFSASKEKLKVV---DLIGRSIALYATE 275
Query: 507 D 509
D
Sbjct: 276 D 276
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 222 VHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTG 320
+ V+ ++GL P +GFHVH G + GC+ G
Sbjct: 37 ITVKENVSGLKPVLHGFHVHALGGTTNGCMRNG 69
>04_04_1273 -
32307273-32307569,32307659-32307791,32307874-32308105,
32308220-32308436,32308594-32308718,32309416-32310757
Length = 781
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 174 LWIERQWRGTAW*SHDEPSP 115
LW ++W TAW S D+PSP
Sbjct: 173 LWSGQEWFITAWRSADDPSP 192
>12_02_1170 -
26663491-26663602,26663999-26664104,26664613-26664816,
26664914-26665076,26665196-26665317,26665702-26665969
Length = 324
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 59 SQRENKNXASTLIPGCDRSGDGSSWLHHAVPRHCR 163
S+ KN A+ + G D G SWL +PR R
Sbjct: 249 SRHSVKNGAADQLTGVDEEGHRLSWLTETIPRMLR 283
>11_04_0091 -
13392864-13392950,13393534-13393579,13393706-13393819,
13394135-13394256,13394360-13394431,13395663-13395812,
13399258-13399341,13399459-13399560,13399634-13399671,
13399762-13399864,13399978-13400389,13400493-13400671
Length = 502
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 528 GHSCRNHQLSRGAPPLCR*CRADPI 454
G + +H+ GAPPL R C A P+
Sbjct: 109 GENLNHHRSPAGAPPLTRLCAAGPV 133
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 580 TPQATRPPALPVFLESGWSLLP*SSAFSWSTTALP 476
T A +P A+P + W+ P +A W T A P
Sbjct: 249 TDAAAQPAAIPAQAGADWTAAPAPAAGGWDTAAAP 283
>12_02_0871 +
23865343-23866016,23866122-23866170,23866276-23866356,
23866599-23866718,23866957-23867055,23867135-23867194,
23867316-23867410,23867483-23867508,23869212-23869285,
23870194-23870259,23871027-23871099,23871585-23871622,
23873758-23873871,23876079-23876195,23876288-23876368,
23876468-23876536,23876631-23876669,23876809-23876973,
23877380-23877484,23877569-23877637,23877754-23877816,
23877903-23878021,23878124-23878348,23878409-23878610
Length = 940
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 34 LRXXILRRKPTRKQKXCFNSYSWLRSLWRRLIMASPRRPAPLPFYPQKRLEATSHSLRFK 213
LR I R +P R+QK C + S RS R+ I + +RP L + +++ S R K
Sbjct: 224 LRRSIARDEPPRRQKRCSSICSSERSWSRKKIGVTIQRPFNLRTERRGKMKEESLVQRMK 283
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 577 PQATRPPALPVFLESGWSLLP*SSAFSWSTTALPMMPCGP 458
P+A+ PA PV GW++ P ++ +S+S + P
Sbjct: 591 PRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAP 630
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 573 KRLD-RQRCRSSWSPDGH-SCRNHQLSRGAP 487
KR+D RQRC+ S+SP SC + +L AP
Sbjct: 453 KRMDDRQRCQCSFSPVARPSCGHDELQAAAP 483
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,644,487
Number of Sequences: 37544
Number of extensions: 441215
Number of successful extensions: 1371
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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